Gene : Glyma.02G108600 G. max Wm82.a2.v1
Defline:  (1 of 14) PTHR31089:SF4 - CYCLIC DOF FACTOR 2-RELATED Genomic Order:  1086
Name:  ? Glyma.02G108600 Secondary Identifier:  ? PAC:30507925
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G108600 0.5kb upstream 0.5kb upstream 4422 true Chr02: 10381276-10385697 Glycine max
Glyma.02G108600 0.5kb upstream 0.5kb upstream 500 false Chr02: 10381276-10381775 Glycine max
Glyma.02G108600 0.5kb downstream 0.5kb downstream 4422 true Chr02: 10381776-10386197 Glycine max
Glyma.02G108600 0.5kb downstream 0.5kb downstream 500 false Chr02: 10385698-10386197 Glycine max
Glyma.02G108600 1.0kb upstream 1.0kb upstream 4922 true Chr02: 10380776-10385697 Glycine max
Glyma.02G108600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 10380776-10381775 Glycine max
Glyma.02G108600 1.0kb downstream 1.0kb downstream 4922 true Chr02: 10381776-10386697 Glycine max
Glyma.02G108600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 10385698-10386697 Glycine max
Glyma.02G108600 2.0kb upstream 2.0kb upstream 5922 true Chr02: 10379776-10385697 Glycine max
Glyma.02G108600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 10379776-10381775 Glycine max
Glyma.02G108600 2.0kb downstream 2.0kb downstream 5922 true Chr02: 10381776-10387697 Glycine max
Glyma.02G108600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 10385698-10387697 Glycine max
Glyma.02G108600 5.0kb upstream 5.0kb upstream 8922 true Chr02: 10376776-10385697 Glycine max
Glyma.02G108600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 10376776-10381775 Glycine max
Glyma.02G108600 5.0kb downstream 5.0kb downstream 8922 true Chr02: 10381776-10390697 Glycine max
Glyma.02G108600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 10385698-10390697 Glycine max
Glyma.02G108600 10.0kb upstream 10.0kb upstream 13922 true Chr02: 10371776-10385697 Glycine max
Glyma.02G108600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 10371776-10381775 Glycine max
Glyma.02G108600 10.0kb downstream 10.0kb downstream 13922 true Chr02: 10381776-10395697 Glycine max
Glyma.02G108600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 10385698-10395697 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298902 5265 Fabidae View MSA
124038369 5270 Rosid View MSA
123751425 5271 Pentapetalae View MSA
122791287 5272 Eudicot View MSA
122048139 5273 Angiosperm View MSA
121349903 5274 Embryophyte View MSA
123427226 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.34586 0.0 14.9716   High
cufflinks 2.25867 0.0 7.07153    
cufflinks 2.39099 0.0 7.41719    
cufflinks 1.99282 0.0 6.32748    
cufflinks 0.189387 0.0 0.724031 Low  
cufflinks 0.164653 0.0 0.63369 Low Low
cufflinks 0.201285 0.0 0.76704 Low  
cufflinks 0.741089 0.0 2.6258    
cufflinks 0.212579 0.0 0.808489 Low  
cufflinks 0.795        
cufflinks 0.107        
cufflinks 1.548        
cufflinks 0.079     Low  
cufflinks 0.012     Low Low
cufflinks 0.076        
cufflinks 3.409       High
cufflinks 0.06     Low  
cufflinks 1.263        
cufflinks 1.512        
cufflinks 1.594        
cufflinks 0.029     Low Low
cufflinks 2.831       High
cufflinks 2.353        
cufflinks 0.055     Low  
cufflinks 2.918       High
cufflinks 0.025     Low Low

0 Strain