Gene : Glyma.02G107500 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER Genomic Order:  1075
Name:  ? Glyma.02G107500 Secondary Identifier:  ? PAC:30508032
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G107500 0.5kb upstream 0.5kb upstream 4826 true Chr02: 10252116-10256941 Glycine max
Glyma.02G107500 0.5kb upstream 0.5kb upstream 500 false Chr02: 10256442-10256941 Glycine max
Glyma.02G107500 0.5kb downstream 0.5kb downstream 4826 true Chr02: 10251616-10256441 Glycine max
Glyma.02G107500 0.5kb downstream 0.5kb downstream 500 false Chr02: 10251616-10252115 Glycine max
Glyma.02G107500 1.0kb upstream 1.0kb upstream 5326 true Chr02: 10252116-10257441 Glycine max
Glyma.02G107500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 10256442-10257441 Glycine max
Glyma.02G107500 1.0kb downstream 1.0kb downstream 5326 true Chr02: 10251116-10256441 Glycine max
Glyma.02G107500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 10251116-10252115 Glycine max
Glyma.02G107500 2.0kb upstream 2.0kb upstream 6326 true Chr02: 10252116-10258441 Glycine max
Glyma.02G107500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 10256442-10258441 Glycine max
Glyma.02G107500 2.0kb downstream 2.0kb downstream 6326 true Chr02: 10250116-10256441 Glycine max
Glyma.02G107500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 10250116-10252115 Glycine max
Glyma.02G107500 5.0kb upstream 5.0kb upstream 9326 true Chr02: 10252116-10261441 Glycine max
Glyma.02G107500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 10256442-10261441 Glycine max
Glyma.02G107500 5.0kb downstream 5.0kb downstream 9326 true Chr02: 10247116-10256441 Glycine max
Glyma.02G107500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 10247116-10252115 Glycine max
Glyma.02G107500 10.0kb upstream 10.0kb upstream 14326 true Chr02: 10252116-10266441 Glycine max
Glyma.02G107500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 10256442-10266441 Glycine max
Glyma.02G107500 10.0kb downstream 10.0kb downstream 14326 true Chr02: 10242116-10256441 Glycine max
Glyma.02G107500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 10242116-10252115 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313132 5265 Fabidae View MSA
124070525 5270 Rosid View MSA
123751414 5271 Pentapetalae View MSA
122787187 5272 Eudicot View MSA
122048569 5273 Angiosperm View MSA
121311024 5274 Embryophyte View MSA
123428817 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.436 0.0 39.1479    
cufflinks 12.7981 0.0 35.0663    
cufflinks 26.732 0.0 71.3197 High  
cufflinks 11.215 0.0 31.0264    
cufflinks 17.6344 0.0 47.302    
cufflinks 72.1872 0.0 204.878 High High
cufflinks 7.10904 0.0 20.5594   Low
cufflinks 21.2394 0.0 56.8015 High  
cufflinks 19.0554 0.0 51.0616    
cufflinks 8.093     High  
cufflinks 27.959     High High
cufflinks 4.04        
cufflinks 5.175        
cufflinks 3.335        
cufflinks 10.413     High  
cufflinks 4.275        
cufflinks 17.732     High High
cufflinks 3.582        
cufflinks 3.563        
cufflinks 3.601        
cufflinks 20.92     High High
cufflinks 3.456        
cufflinks 4.304        
cufflinks 27.291     High High
cufflinks 3.619        
cufflinks 21.319     High High

0 Strain