Gene : Glyma.02G113500 G. max Wm82.a2.v1
Defline:  (1 of 2) PF08755 - Hemimethylated DNA-binding protein YccV like (YccV-like) Genomic Order:  1135
Name:  ? Glyma.02G113500 Secondary Identifier:  ? PAC:30509535
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Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G113500 0.5kb upstream 0.5kb upstream 4477 true Chr02: 11038257-11042733 Glycine max
Glyma.02G113500 0.5kb upstream 0.5kb upstream 500 false Chr02: 11042234-11042733 Glycine max
Glyma.02G113500 0.5kb downstream 0.5kb downstream 4477 true Chr02: 11037757-11042233 Glycine max
Glyma.02G113500 0.5kb downstream 0.5kb downstream 500 false Chr02: 11037757-11038256 Glycine max
Glyma.02G113500 1.0kb upstream 1.0kb upstream 4977 true Chr02: 11038257-11043233 Glycine max
Glyma.02G113500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 11042234-11043233 Glycine max
Glyma.02G113500 1.0kb downstream 1.0kb downstream 4977 true Chr02: 11037257-11042233 Glycine max
Glyma.02G113500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 11037257-11038256 Glycine max
Glyma.02G113500 2.0kb upstream 2.0kb upstream 5977 true Chr02: 11038257-11044233 Glycine max
Glyma.02G113500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 11042234-11044233 Glycine max
Glyma.02G113500 2.0kb downstream 2.0kb downstream 5977 true Chr02: 11036257-11042233 Glycine max
Glyma.02G113500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 11036257-11038256 Glycine max
Glyma.02G113500 5.0kb upstream 5.0kb upstream 8977 true Chr02: 11038257-11047233 Glycine max
Glyma.02G113500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 11042234-11047233 Glycine max
Glyma.02G113500 5.0kb downstream 5.0kb downstream 8977 true Chr02: 11033257-11042233 Glycine max
Glyma.02G113500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 11033257-11038256 Glycine max
Glyma.02G113500 10.0kb upstream 10.0kb upstream 13977 true Chr02: 11038257-11052233 Glycine max
Glyma.02G113500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 11042234-11052233 Glycine max
Glyma.02G113500 10.0kb downstream 10.0kb downstream 13977 true Chr02: 11028257-11042233 Glycine max
Glyma.02G113500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 11028257-11038256 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302441 5265 Fabidae View MSA
124064311 5270 Rosid View MSA
123738322 5271 Pentapetalae View MSA
122791068 5272 Eudicot View MSA
122042026 5273 Angiosperm View MSA
121345511 5274 Embryophyte View MSA
123424975 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.1854 0.0 78.7943   High
cufflinks 7.478 0.0 28.5219    
cufflinks 7.91429 0.0 33.5632    
cufflinks 7.20993 0.0 30.5999    
cufflinks 4.582 0.0 20.1035   Low
cufflinks 11.5246 0.0 45.3288    
cufflinks 6.4574 0.0 25.2701    
cufflinks 6.58286 0.0 21.9396    
cufflinks 5.15066 0.0 21.7945    
cufflinks 1.143        
cufflinks 1.0        
cufflinks 1.289        
cufflinks 0.934        
cufflinks 0.799       Low
cufflinks 0.999        
cufflinks 2.691       High
cufflinks 0.584       Low
cufflinks 1.31        
cufflinks 1.272        
cufflinks 3.064       High
cufflinks 0.939        
cufflinks 2.895       High
cufflinks 2.078        
cufflinks 1.294        
cufflinks 3.129       High
cufflinks 0.816        

0 Strain