Gene : Glyma.02G113100 G. max Wm82.a2.v1
Defline:  (1 of 10) 5.4.99.5 - Chorismate mutase / Hydroxyphenylpyruvate synthase Genomic Order:  1131
Name:  ? Glyma.02G113100 Secondary Identifier:  ? PAC:30507243
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-3461 Glycine max pathologic  
Gmax PWY-3462 Glycine max pathologic  
Gmax PWY-3481 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G113100 0.5kb upstream 0.5kb upstream 5319 true Chr02: 10947741-10953059 Glycine max
Glyma.02G113100 0.5kb upstream 0.5kb upstream 500 false Chr02: 10952560-10953059 Glycine max
Glyma.02G113100 0.5kb downstream 0.5kb downstream 5319 true Chr02: 10947241-10952559 Glycine max
Glyma.02G113100 0.5kb downstream 0.5kb downstream 500 false Chr02: 10947241-10947740 Glycine max
Glyma.02G113100 1.0kb upstream 1.0kb upstream 5819 true Chr02: 10947741-10953559 Glycine max
Glyma.02G113100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 10952560-10953559 Glycine max
Glyma.02G113100 1.0kb downstream 1.0kb downstream 5819 true Chr02: 10946741-10952559 Glycine max
Glyma.02G113100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 10946741-10947740 Glycine max
Glyma.02G113100 2.0kb upstream 2.0kb upstream 6819 true Chr02: 10947741-10954559 Glycine max
Glyma.02G113100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 10952560-10954559 Glycine max
Glyma.02G113100 2.0kb downstream 2.0kb downstream 6819 true Chr02: 10945741-10952559 Glycine max
Glyma.02G113100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 10945741-10947740 Glycine max
Glyma.02G113100 5.0kb upstream 5.0kb upstream 9819 true Chr02: 10947741-10957559 Glycine max
Glyma.02G113100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 10952560-10957559 Glycine max
Glyma.02G113100 5.0kb downstream 5.0kb downstream 9819 true Chr02: 10942741-10952559 Glycine max
Glyma.02G113100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 10942741-10947740 Glycine max
Glyma.02G113100 10.0kb upstream 10.0kb upstream 14819 true Chr02: 10947741-10962559 Glycine max
Glyma.02G113100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 10952560-10962559 Glycine max
Glyma.02G113100 10.0kb downstream 10.0kb downstream 14819 true Chr02: 10937741-10952559 Glycine max
Glyma.02G113100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 10937741-10947740 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041201 5273 Angiosperm View MSA
122309735 5265 Fabidae View MSA
124071158 5270 Rosid View MSA
123736644 5271 Pentapetalae View MSA
122792454 5272 Eudicot View MSA
121347234 5274 Embryophyte View MSA
123427559 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0671176 0.0 0.273424 Low  
cufflinks 0.0321344 0.0 0.137257 Low Low
cufflinks 0.0203408 0.0 0.0900348 Low Low
cufflinks 2.20258 0.0 7.42109   High
cufflinks 0.229985 0.0 0.893316 Low  
cufflinks 0.186992 0.0 0.731875 Low  
cufflinks 1.05128 0.0 3.79374   High
cufflinks 0.164212 0.0 0.645542 Low  
cufflinks 0.945189 0.0 3.4269    
cufflinks 0.024     Low  
cufflinks 0.024     Low  
cufflinks 0.058     Low  
cufflinks 0.095       High
cufflinks 0.144       High
cufflinks 0.077        
cufflinks 0.019     Low  
cufflinks 0.089       High
cufflinks 0.031     Low  
cufflinks 0.006     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.107       High
cufflinks 0.02     Low  
cufflinks 0.008     Low Low
cufflinks 0.016     Low  
cufflinks 0.025     Low  
cufflinks 0.045     Low  

0 Strain