Gene : Glyma.19G012100 G. max Wm82.a2.v1

Defline:  (1 of 2) PTHR32285:SF28 - PROTEIN ALTERED XYLOGLUCAN 4-LIKE Genomic Order:  121
Name:  ? Glyma.19G012100 Secondary Identifier:  ? PAC:30513001

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G012100 0.5kb upstream 0.5kb upstream 6088 true Chr19: 1155711-1161798 Glycine max
Glyma.19G012100 0.5kb upstream 0.5kb upstream 500 false Chr19: 1161299-1161798 Glycine max
Glyma.19G012100 0.5kb downstream 0.5kb downstream 6088 true Chr19: 1155211-1161298 Glycine max
Glyma.19G012100 0.5kb downstream 0.5kb downstream 500 false Chr19: 1155211-1155710 Glycine max
Glyma.19G012100 1.0kb upstream 1.0kb upstream 6588 true Chr19: 1155711-1162298 Glycine max
Glyma.19G012100 1.0kb upstream 1.0kb upstream 1000 false Chr19: 1161299-1162298 Glycine max
Glyma.19G012100 1.0kb downstream 1.0kb downstream 6588 true Chr19: 1154711-1161298 Glycine max
Glyma.19G012100 1.0kb downstream 1.0kb downstream 1000 false Chr19: 1154711-1155710 Glycine max
Glyma.19G012100 2.0kb upstream 2.0kb upstream 7588 true Chr19: 1155711-1163298 Glycine max
Glyma.19G012100 2.0kb upstream 2.0kb upstream 2000 false Chr19: 1161299-1163298 Glycine max
Glyma.19G012100 2.0kb downstream 2.0kb downstream 7588 true Chr19: 1153711-1161298 Glycine max
Glyma.19G012100 2.0kb downstream 2.0kb downstream 2000 false Chr19: 1153711-1155710 Glycine max
Glyma.19G012100 5.0kb upstream 5.0kb upstream 10588 true Chr19: 1155711-1166298 Glycine max
Glyma.19G012100 5.0kb upstream 5.0kb upstream 5000 false Chr19: 1161299-1166298 Glycine max
Glyma.19G012100 5.0kb downstream 5.0kb downstream 10588 true Chr19: 1150711-1161298 Glycine max
Glyma.19G012100 5.0kb downstream 5.0kb downstream 5000 false Chr19: 1150711-1155710 Glycine max
Glyma.19G012100 10.0kb upstream 10.0kb upstream 15588 true Chr19: 1155711-1171298 Glycine max
Glyma.19G012100 10.0kb upstream 10.0kb upstream 10000 false Chr19: 1161299-1171298 Glycine max
Glyma.19G012100 10.0kb downstream 10.0kb downstream 15588 true Chr19: 1145711-1161298 Glycine max
Glyma.19G012100 10.0kb downstream 10.0kb downstream 10000 false Chr19: 1145711-1155710 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307496 5265 Fabidae View MSA
124066209 5270 Rosid View MSA
123753462 5271 Pentapetalae View MSA
122797188 5272 Eudicot View MSA
122050805 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121350671 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0237352 0.0 0.101147 Low Low
cufflinks 0.0582137 0.0 0.235051 Low  
cufflinks 0.294695 0.0 1.11381    
cufflinks 0.126408 0.0 0.495242 Low  
cufflinks 0.948087 0.0 3.35801    
cufflinks 6.46483 0.0 18.1382   High
cufflinks 0.276151 0.0 1.04694    
cufflinks 0.0459967 0.0 0.187457 Low  
cufflinks 2.57459 0.0 8.13497   High
cufflinks 0.003     Low  
cufflinks 0.004     Low  
cufflinks 0.082     Low  
cufflinks 0.255       High
cufflinks 0.045     Low  
cufflinks 0.504       High
cufflinks 0.007     Low  
cufflinks 0.046     Low  
cufflinks 0.231       High
cufflinks 0.002     Low Low
cufflinks 0.003     Low  
cufflinks 0.004     Low  
cufflinks 0.015     Low  
cufflinks 0.013     Low  
cufflinks 0.003     Low  
cufflinks 0.007     Low  
cufflinks 0.025     Low  

0 Strain