Gene : Glyma.19G012300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR15141//PTHR15141:SF51 - TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 3 Genomic Order:  123
Name:  ? Glyma.19G012300 Secondary Identifier:  ? PAC:30514292
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G012300 0.5kb upstream 0.5kb upstream 8421 true Chr19: 1165111-1173531 Glycine max
Glyma.19G012300 0.5kb upstream 0.5kb upstream 500 false Chr19: 1173032-1173531 Glycine max
Glyma.19G012300 0.5kb downstream 0.5kb downstream 8421 true Chr19: 1164611-1173031 Glycine max
Glyma.19G012300 0.5kb downstream 0.5kb downstream 500 false Chr19: 1164611-1165110 Glycine max
Glyma.19G012300 1.0kb upstream 1.0kb upstream 8921 true Chr19: 1165111-1174031 Glycine max
Glyma.19G012300 1.0kb upstream 1.0kb upstream 1000 false Chr19: 1173032-1174031 Glycine max
Glyma.19G012300 1.0kb downstream 1.0kb downstream 8921 true Chr19: 1164111-1173031 Glycine max
Glyma.19G012300 1.0kb downstream 1.0kb downstream 1000 false Chr19: 1164111-1165110 Glycine max
Glyma.19G012300 2.0kb upstream 2.0kb upstream 9921 true Chr19: 1165111-1175031 Glycine max
Glyma.19G012300 2.0kb upstream 2.0kb upstream 2000 false Chr19: 1173032-1175031 Glycine max
Glyma.19G012300 2.0kb downstream 2.0kb downstream 9921 true Chr19: 1163111-1173031 Glycine max
Glyma.19G012300 2.0kb downstream 2.0kb downstream 2000 false Chr19: 1163111-1165110 Glycine max
Glyma.19G012300 5.0kb upstream 5.0kb upstream 12921 true Chr19: 1165111-1178031 Glycine max
Glyma.19G012300 5.0kb upstream 5.0kb upstream 5000 false Chr19: 1173032-1178031 Glycine max
Glyma.19G012300 5.0kb downstream 5.0kb downstream 12921 true Chr19: 1160111-1173031 Glycine max
Glyma.19G012300 5.0kb downstream 5.0kb downstream 5000 false Chr19: 1160111-1165110 Glycine max
Glyma.19G012300 10.0kb upstream 10.0kb upstream 17921 true Chr19: 1165111-1183031 Glycine max
Glyma.19G012300 10.0kb upstream 10.0kb upstream 10000 false Chr19: 1173032-1183031 Glycine max
Glyma.19G012300 10.0kb downstream 10.0kb downstream 17921 true Chr19: 1155111-1173031 Glycine max
Glyma.19G012300 10.0kb downstream 10.0kb downstream 10000 false Chr19: 1155111-1165110 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308668 5265 Fabidae View MSA
124070029 5270 Rosid View MSA
123751253 5271 Pentapetalae View MSA
122792090 5272 Eudicot View MSA
122044388 5273 Angiosperm View MSA
121350650 5274 Embryophyte View MSA
123381837 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.621 0.0 227.993 High High
cufflinks 13.6963 0.0 88.3027   Low
cufflinks 28.8115 0.0 243.914 High High
cufflinks 25.5509 0.0 204.456 High  
cufflinks 18.1837 0.0 125.67    
cufflinks 20.0759 0.0 162.589    
cufflinks 21.4877 0.0 157.49    
cufflinks 20.7463 0.0 151.125    
cufflinks 24.678 0.0 193.57 High  
cufflinks 1.787        
cufflinks 2.303        
cufflinks 3.023       High
cufflinks 1.651       Low
cufflinks 1.703        
cufflinks 2.635       High
cufflinks 2.122        
cufflinks 1.423       Low
cufflinks 2.363        
cufflinks 2.397        
cufflinks 2.168        
cufflinks 1.793        
cufflinks 2.29        
cufflinks 1.628       Low
cufflinks 2.413        
cufflinks 1.946        
cufflinks 2.222        

0 Strain