Gene : Glyma.02G118500 G. max Wm82.a2.v1
Defline:  (1 of 4) PF16136 - Putative nuclear localisation signal (NINJA_B) Genomic Order:  1185
Name:  ? Glyma.02G118500 Secondary Identifier:  ? PAC:30506226
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G118500 0.5kb upstream 0.5kb upstream 5744 true Chr02: 11676501-11682244 Glycine max
Glyma.02G118500 0.5kb upstream 0.5kb upstream 500 false Chr02: 11676501-11677000 Glycine max
Glyma.02G118500 0.5kb downstream 0.5kb downstream 5744 true Chr02: 11677001-11682744 Glycine max
Glyma.02G118500 0.5kb downstream 0.5kb downstream 500 false Chr02: 11682245-11682744 Glycine max
Glyma.02G118500 1.0kb upstream 1.0kb upstream 6244 true Chr02: 11676001-11682244 Glycine max
Glyma.02G118500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 11676001-11677000 Glycine max
Glyma.02G118500 1.0kb downstream 1.0kb downstream 6244 true Chr02: 11677001-11683244 Glycine max
Glyma.02G118500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 11682245-11683244 Glycine max
Glyma.02G118500 2.0kb upstream 2.0kb upstream 7244 true Chr02: 11675001-11682244 Glycine max
Glyma.02G118500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 11675001-11677000 Glycine max
Glyma.02G118500 2.0kb downstream 2.0kb downstream 7244 true Chr02: 11677001-11684244 Glycine max
Glyma.02G118500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 11682245-11684244 Glycine max
Glyma.02G118500 5.0kb upstream 5.0kb upstream 10244 true Chr02: 11672001-11682244 Glycine max
Glyma.02G118500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 11672001-11677000 Glycine max
Glyma.02G118500 5.0kb downstream 5.0kb downstream 10244 true Chr02: 11677001-11687244 Glycine max
Glyma.02G118500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 11682245-11687244 Glycine max
Glyma.02G118500 10.0kb upstream 10.0kb upstream 15244 true Chr02: 11667001-11682244 Glycine max
Glyma.02G118500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 11667001-11677000 Glycine max
Glyma.02G118500 10.0kb downstream 10.0kb downstream 15244 true Chr02: 11677001-11692244 Glycine max
Glyma.02G118500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 11682245-11692244 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315194 5265 Fabidae View MSA
124071046 5270 Rosid View MSA
123753389 5271 Pentapetalae View MSA
122792096 5272 Eudicot View MSA
122050177 5273 Angiosperm View MSA
121311781 5274 Embryophyte View MSA
123349031 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.48763 0.0 7.60474    
cufflinks 3.45478 0.0 10.1325    
cufflinks 2.65603 0.0 8.05735    
cufflinks 0.90665 0.0 3.1543   Low
cufflinks 7.96627 0.0 21.5348   High
cufflinks 3.46895 0.0 10.1355    
cufflinks 9.28802 0.0 24.9354   High
cufflinks 1.24395 0.0 4.18562   Low
cufflinks 2.41487 0.0 7.42694    
cufflinks 2.395        
cufflinks 2.953        
cufflinks 2.116        
cufflinks 3.572       High
cufflinks 2.717        
cufflinks 5.284     High High
cufflinks 1.259       Low
cufflinks 2.202        
cufflinks 2.562        
cufflinks 1.989        
cufflinks 1.305        
cufflinks 1.318        
cufflinks 0.966       Low
cufflinks 0.871       Low
cufflinks 2.624        
cufflinks 1.658        
cufflinks 2.284        

0 Strain