Gene : Glyma.02G116400 G. max Wm82.a2.v1
Defline:  (1 of 3) PF07168 - Ureide permease (Ureide_permease) Genomic Order:  1164
Name:  ? Glyma.02G116400 Secondary Identifier:  ? PAC:30509999
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G116400 0.5kb upstream 0.5kb upstream 5851 true Chr02: 11340621-11346471 Glycine max
Glyma.02G116400 0.5kb upstream 0.5kb upstream 500 false Chr02: 11340621-11341120 Glycine max
Glyma.02G116400 0.5kb downstream 0.5kb downstream 5851 true Chr02: 11341121-11346971 Glycine max
Glyma.02G116400 0.5kb downstream 0.5kb downstream 500 false Chr02: 11346472-11346971 Glycine max
Glyma.02G116400 1.0kb upstream 1.0kb upstream 6351 true Chr02: 11340121-11346471 Glycine max
Glyma.02G116400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 11340121-11341120 Glycine max
Glyma.02G116400 1.0kb downstream 1.0kb downstream 6351 true Chr02: 11341121-11347471 Glycine max
Glyma.02G116400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 11346472-11347471 Glycine max
Glyma.02G116400 2.0kb upstream 2.0kb upstream 7351 true Chr02: 11339121-11346471 Glycine max
Glyma.02G116400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 11339121-11341120 Glycine max
Glyma.02G116400 2.0kb downstream 2.0kb downstream 7351 true Chr02: 11341121-11348471 Glycine max
Glyma.02G116400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 11346472-11348471 Glycine max
Glyma.02G116400 5.0kb upstream 5.0kb upstream 10351 true Chr02: 11336121-11346471 Glycine max
Glyma.02G116400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 11336121-11341120 Glycine max
Glyma.02G116400 5.0kb downstream 5.0kb downstream 10351 true Chr02: 11341121-11351471 Glycine max
Glyma.02G116400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 11346472-11351471 Glycine max
Glyma.02G116400 10.0kb upstream 10.0kb upstream 15351 true Chr02: 11331121-11346471 Glycine max
Glyma.02G116400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 11331121-11341120 Glycine max
Glyma.02G116400 10.0kb downstream 10.0kb downstream 15351 true Chr02: 11341121-11356471 Glycine max
Glyma.02G116400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 11346472-11356471 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311631 5265 Fabidae View MSA
124063628 5270 Rosid View MSA
123742052 5271 Pentapetalae View MSA
122794929 5272 Eudicot View MSA
122045429 5273 Angiosperm View MSA
121345415 5274 Embryophyte View MSA
123424654 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.56182 0.0 8.90582    
cufflinks 1.25853 0.0 5.34554    
cufflinks 10.2578 0.0 40.469    
cufflinks 0.552403 0.0 2.61118   Low
cufflinks 16.7024 0.0 82.2521    
cufflinks 88.7448 0.0 460.512 High High
cufflinks 0.195975 0.0 0.761624 Low Low
cufflinks 12.7935 0.0 57.9409    
cufflinks 24.4527 0.0 93.0767 High  
cufflinks 1.309        
cufflinks 0.846        
cufflinks 0.532        
cufflinks 3.31       High
cufflinks 2.707        
cufflinks 1.169        
cufflinks 0.391        
cufflinks 6.771     High High
cufflinks 0.529        
cufflinks 0.13       Low
cufflinks 0.145       Low
cufflinks 1.659        
cufflinks 0.28        
cufflinks 0.299        
cufflinks 4.198       High
cufflinks 0.317        
cufflinks 3.869       High

0 Strain