Gene : Glyma.02G121100 G. max Wm82.a2.v1
Defline:  (1 of 10) PF09011 - HMG-box domain (HMG_box_2) Genomic Order:  1211
Name:  ? Glyma.02G121100 Secondary Identifier:  ? PAC:30506185
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G121100 0.5kb upstream 0.5kb upstream 2841 true Chr02: 11982839-11985679 Glycine max
Glyma.02G121100 0.5kb upstream 0.5kb upstream 500 false Chr02: 11982839-11983338 Glycine max
Glyma.02G121100 0.5kb downstream 0.5kb downstream 2841 true Chr02: 11983339-11986179 Glycine max
Glyma.02G121100 0.5kb downstream 0.5kb downstream 500 false Chr02: 11985680-11986179 Glycine max
Glyma.02G121100 1.0kb upstream 1.0kb upstream 3341 true Chr02: 11982339-11985679 Glycine max
Glyma.02G121100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 11982339-11983338 Glycine max
Glyma.02G121100 1.0kb downstream 1.0kb downstream 3341 true Chr02: 11983339-11986679 Glycine max
Glyma.02G121100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 11985680-11986679 Glycine max
Glyma.02G121100 2.0kb upstream 2.0kb upstream 4341 true Chr02: 11981339-11985679 Glycine max
Glyma.02G121100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 11981339-11983338 Glycine max
Glyma.02G121100 2.0kb downstream 2.0kb downstream 4341 true Chr02: 11983339-11987679 Glycine max
Glyma.02G121100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 11985680-11987679 Glycine max
Glyma.02G121100 5.0kb upstream 5.0kb upstream 7341 true Chr02: 11978339-11985679 Glycine max
Glyma.02G121100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 11978339-11983338 Glycine max
Glyma.02G121100 5.0kb downstream 5.0kb downstream 7341 true Chr02: 11983339-11990679 Glycine max
Glyma.02G121100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 11985680-11990679 Glycine max
Glyma.02G121100 10.0kb upstream 10.0kb upstream 12341 true Chr02: 11973339-11985679 Glycine max
Glyma.02G121100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 11973339-11983338 Glycine max
Glyma.02G121100 10.0kb downstream 10.0kb downstream 12341 true Chr02: 11983339-11995679 Glycine max
Glyma.02G121100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 11985680-11995679 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303467 5265 Fabidae View MSA
124064616 5270 Rosid View MSA
123751442 5271 Pentapetalae View MSA
122787834 5272 Eudicot View MSA
122046803 5273 Angiosperm View MSA
121349155 5274 Embryophyte View MSA
123426058 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 8.72677E-4 0.0 0.245149 Low  
cufflinks 1.80293 0.0 12.5491   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.00942053 0.0 0.699328 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.133        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.013     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 10.511     High High
cufflinks 0.029     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain