Gene : Glyma.19G055400 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR31358:SF12 - TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY Genomic Order:  554
Name:  ? Glyma.19G055400 Secondary Identifier:  ? PAC:30512089
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G055400 0.5kb upstream 0.5kb upstream 5306 true Chr19: 9311088-9316393 Glycine max
Glyma.19G055400 0.5kb upstream 0.5kb upstream 500 false Chr19: 9315894-9316393 Glycine max
Glyma.19G055400 0.5kb downstream 0.5kb downstream 5306 true Chr19: 9310588-9315893 Glycine max
Glyma.19G055400 0.5kb downstream 0.5kb downstream 500 false Chr19: 9310588-9311087 Glycine max
Glyma.19G055400 1.0kb upstream 1.0kb upstream 5806 true Chr19: 9311088-9316893 Glycine max
Glyma.19G055400 1.0kb upstream 1.0kb upstream 1000 false Chr19: 9315894-9316893 Glycine max
Glyma.19G055400 1.0kb downstream 1.0kb downstream 5806 true Chr19: 9310088-9315893 Glycine max
Glyma.19G055400 1.0kb downstream 1.0kb downstream 1000 false Chr19: 9310088-9311087 Glycine max
Glyma.19G055400 2.0kb upstream 2.0kb upstream 6806 true Chr19: 9311088-9317893 Glycine max
Glyma.19G055400 2.0kb upstream 2.0kb upstream 2000 false Chr19: 9315894-9317893 Glycine max
Glyma.19G055400 2.0kb downstream 2.0kb downstream 6806 true Chr19: 9309088-9315893 Glycine max
Glyma.19G055400 2.0kb downstream 2.0kb downstream 2000 false Chr19: 9309088-9311087 Glycine max
Glyma.19G055400 5.0kb upstream 5.0kb upstream 9806 true Chr19: 9311088-9320893 Glycine max
Glyma.19G055400 5.0kb upstream 5.0kb upstream 5000 false Chr19: 9315894-9320893 Glycine max
Glyma.19G055400 5.0kb downstream 5.0kb downstream 9806 true Chr19: 9306088-9315893 Glycine max
Glyma.19G055400 5.0kb downstream 5.0kb downstream 5000 false Chr19: 9306088-9311087 Glycine max
Glyma.19G055400 10.0kb upstream 10.0kb upstream 14806 true Chr19: 9311088-9325893 Glycine max
Glyma.19G055400 10.0kb upstream 10.0kb upstream 10000 false Chr19: 9315894-9325893 Glycine max
Glyma.19G055400 10.0kb downstream 10.0kb downstream 14806 true Chr19: 9301088-9315893 Glycine max
Glyma.19G055400 10.0kb downstream 10.0kb downstream 10000 false Chr19: 9301088-9311087 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314880 5265 Fabidae View MSA
124072865 5270 Rosid View MSA
123746894 5271 Pentapetalae View MSA
122791209 5272 Eudicot View MSA
122048552 5273 Angiosperm View MSA
121351484 5274 Embryophyte View MSA
123382183 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0334181 0.0 0.136176 Low Low
cufflinks 7.87912 0.0 30.8597   High
cufflinks 0.562673 0.0 2.45568    
cufflinks 1.6644 0.0 7.40453    
cufflinks 2.23786 0.0 9.16421    
cufflinks 1.61831 0.0 5.58563    
cufflinks 3.14712 0.0 11.3886    
cufflinks 1.79404 0.0 7.79176    
cufflinks 2.46271 0.0 9.77009    
cufflinks 0.604        
cufflinks 0.033     Low Low
cufflinks 0.627        
cufflinks 0.774        
cufflinks 0.83        
cufflinks 0.005     Low Low
cufflinks 1.824        
cufflinks 0.083        
cufflinks 0.311        
cufflinks 2.415       High
cufflinks 1.472        
cufflinks 0.087        
cufflinks 1.838        
cufflinks 2.809       High
cufflinks 0.029     Low Low
cufflinks 1.409        
cufflinks 0.148        

0 Strain