Gene : Glyma.02G305400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21649//PTHR21649:SF8 - CHLOROPHYLL A/B BINDING PROTEIN Genomic Order:  3054
Name:  ? Glyma.02G305400 Secondary Identifier:  ? PAC:30506155
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G305400 0.5kb upstream 0.5kb upstream 1957 true Chr02: 48023773-48025729 Glycine max
Glyma.02G305400 0.5kb upstream 0.5kb upstream 500 false Chr02: 48023773-48024272 Glycine max
Glyma.02G305400 0.5kb downstream 0.5kb downstream 1957 true Chr02: 48024273-48026229 Glycine max
Glyma.02G305400 0.5kb downstream 0.5kb downstream 500 false Chr02: 48025730-48026229 Glycine max
Glyma.02G305400 1.0kb upstream 1.0kb upstream 2457 true Chr02: 48023273-48025729 Glycine max
Glyma.02G305400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 48023273-48024272 Glycine max
Glyma.02G305400 1.0kb downstream 1.0kb downstream 2457 true Chr02: 48024273-48026729 Glycine max
Glyma.02G305400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 48025730-48026729 Glycine max
Glyma.02G305400 2.0kb upstream 2.0kb upstream 3457 true Chr02: 48022273-48025729 Glycine max
Glyma.02G305400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 48022273-48024272 Glycine max
Glyma.02G305400 2.0kb downstream 2.0kb downstream 3457 true Chr02: 48024273-48027729 Glycine max
Glyma.02G305400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 48025730-48027729 Glycine max
Glyma.02G305400 5.0kb upstream 5.0kb upstream 6457 true Chr02: 48019273-48025729 Glycine max
Glyma.02G305400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 48019273-48024272 Glycine max
Glyma.02G305400 5.0kb downstream 5.0kb downstream 6457 true Chr02: 48024273-48030729 Glycine max
Glyma.02G305400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 48025730-48030729 Glycine max
Glyma.02G305400 10.0kb upstream 10.0kb upstream 11457 true Chr02: 48014273-48025729 Glycine max
Glyma.02G305400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 48014273-48024272 Glycine max
Glyma.02G305400 10.0kb downstream 10.0kb downstream 11457 true Chr02: 48024273-48035729 Glycine max
Glyma.02G305400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 48025730-48035729 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041019 5273 Angiosperm View MSA
122302628 5265 Fabidae View MSA
124062505 5270 Rosid View MSA
123749191 5271 Pentapetalae View MSA
122791500 5272 Eudicot View MSA
121349648 5274 Embryophyte View MSA
123426313 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 69.2404 0.0 265.996 High  
cufflinks 404.157 0.0 2945.32 High High
cufflinks 31.3805 0.0 106.726 High  
cufflinks 59.7318 0.0 219.944 High  
cufflinks 9.95036 0.0 37.4372    
cufflinks 25.8376 0.0 87.6066 High  
cufflinks 151.85 0.0 654.541 High  
cufflinks 47.3386 0.0 169.121 High  
cufflinks 0.634155 0.0 4.08062   Low
cufflinks 201.799     High  
cufflinks 0.424        
cufflinks 32.079     High  
cufflinks 0.099       Low
cufflinks 0.091       Low
cufflinks 0.177       Low
cufflinks 491.322     High High
cufflinks 0.052     Low Low
cufflinks 38.659     High  
cufflinks 244.064     High  
cufflinks 391.116     High High
cufflinks 0.246        
cufflinks 478.182     High High
cufflinks 366.44     High High
cufflinks 0.457        
cufflinks 485.824     High High
cufflinks 0.338        

0 Strain