Gene : Glyma.02G304500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22572:SF101 - GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE SMALL SUBUNIT, CHLOROPLASTIC Genomic Order:  3045
Name:  ? Glyma.02G304500 Secondary Identifier:  ? PAC:30507442
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax GLYCOGENSYNTH-PWY Glycine max pathologic  
Gmax PWY-622 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G304500 0.5kb upstream 0.5kb upstream 4570 true Chr02: 47949537-47954106 Glycine max
Glyma.02G304500 0.5kb upstream 0.5kb upstream 500 false Chr02: 47949537-47950036 Glycine max
Glyma.02G304500 0.5kb downstream 0.5kb downstream 4570 true Chr02: 47950037-47954606 Glycine max
Glyma.02G304500 0.5kb downstream 0.5kb downstream 500 false Chr02: 47954107-47954606 Glycine max
Glyma.02G304500 1.0kb upstream 1.0kb upstream 5070 true Chr02: 47949037-47954106 Glycine max
Glyma.02G304500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 47949037-47950036 Glycine max
Glyma.02G304500 1.0kb downstream 1.0kb downstream 5070 true Chr02: 47950037-47955106 Glycine max
Glyma.02G304500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 47954107-47955106 Glycine max
Glyma.02G304500 2.0kb upstream 2.0kb upstream 6070 true Chr02: 47948037-47954106 Glycine max
Glyma.02G304500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 47948037-47950036 Glycine max
Glyma.02G304500 2.0kb downstream 2.0kb downstream 6070 true Chr02: 47950037-47956106 Glycine max
Glyma.02G304500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 47954107-47956106 Glycine max
Glyma.02G304500 5.0kb upstream 5.0kb upstream 9070 true Chr02: 47945037-47954106 Glycine max
Glyma.02G304500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 47945037-47950036 Glycine max
Glyma.02G304500 5.0kb downstream 5.0kb downstream 9070 true Chr02: 47950037-47959106 Glycine max
Glyma.02G304500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 47954107-47959106 Glycine max
Glyma.02G304500 10.0kb upstream 10.0kb upstream 14070 true Chr02: 47940037-47954106 Glycine max
Glyma.02G304500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 47940037-47950036 Glycine max
Glyma.02G304500 10.0kb downstream 10.0kb downstream 14070 true Chr02: 47950037-47964106 Glycine max
Glyma.02G304500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 47954107-47964106 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305164 5265 Fabidae View MSA
124067564 5270 Rosid View MSA
123737587 5271 Pentapetalae View MSA
122787627 5272 Eudicot View MSA
122044250 5273 Angiosperm View MSA
121350002 5274 Embryophyte View MSA
123424956 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 124.217 0.0 591.512 High High
cufflinks 18.4199 0.0 54.7157    
cufflinks 8.1475 0.0 26.1732   Low
cufflinks 25.7038 0.0 78.8323 High  
cufflinks 22.6646 0.0 69.0312 High  
cufflinks 15.0617 0.0 46.5558    
cufflinks 23.263 0.0 81.3444 High  
cufflinks 94.5559 0.0 399.8 High High
cufflinks 20.6958 0.0 62.3194 High  
cufflinks 12.473     High  
cufflinks 0.22       Low
cufflinks 4.296        
cufflinks 4.559        
cufflinks 5.741        
cufflinks 0.79       Low
cufflinks 15.32     High  
cufflinks 2.378        
cufflinks 8.204     High  
cufflinks 6.159        
cufflinks 16.521     High  
cufflinks 0.522       Low
cufflinks 17.887     High High
cufflinks 17.743     High High
cufflinks 0.477       Low
cufflinks 18.665     High High
cufflinks 0.834       Low

0 Strain