Gene : Glyma.19G055800 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10641:SF509 - MYB TRANSCRIPTION FACTOR Genomic Order:  558
Name:  ? Glyma.19G055800 Secondary Identifier:  ? PAC:30512557
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G055800 0.5kb upstream 0.5kb upstream 2618 true Chr19: 9381699-9384316 Glycine max
Glyma.19G055800 0.5kb upstream 0.5kb upstream 500 false Chr19: 9383817-9384316 Glycine max
Glyma.19G055800 0.5kb downstream 0.5kb downstream 2618 true Chr19: 9381199-9383816 Glycine max
Glyma.19G055800 0.5kb downstream 0.5kb downstream 500 false Chr19: 9381199-9381698 Glycine max
Glyma.19G055800 1.0kb upstream 1.0kb upstream 3118 true Chr19: 9381699-9384816 Glycine max
Glyma.19G055800 1.0kb upstream 1.0kb upstream 1000 false Chr19: 9383817-9384816 Glycine max
Glyma.19G055800 1.0kb downstream 1.0kb downstream 3118 true Chr19: 9380699-9383816 Glycine max
Glyma.19G055800 1.0kb downstream 1.0kb downstream 1000 false Chr19: 9380699-9381698 Glycine max
Glyma.19G055800 2.0kb upstream 2.0kb upstream 4118 true Chr19: 9381699-9385816 Glycine max
Glyma.19G055800 2.0kb upstream 2.0kb upstream 2000 false Chr19: 9383817-9385816 Glycine max
Glyma.19G055800 2.0kb downstream 2.0kb downstream 4118 true Chr19: 9379699-9383816 Glycine max
Glyma.19G055800 2.0kb downstream 2.0kb downstream 2000 false Chr19: 9379699-9381698 Glycine max
Glyma.19G055800 5.0kb upstream 5.0kb upstream 7118 true Chr19: 9381699-9388816 Glycine max
Glyma.19G055800 5.0kb upstream 5.0kb upstream 5000 false Chr19: 9383817-9388816 Glycine max
Glyma.19G055800 5.0kb downstream 5.0kb downstream 7118 true Chr19: 9376699-9383816 Glycine max
Glyma.19G055800 5.0kb downstream 5.0kb downstream 5000 false Chr19: 9376699-9381698 Glycine max
Glyma.19G055800 10.0kb upstream 10.0kb upstream 12118 true Chr19: 9381699-9393816 Glycine max
Glyma.19G055800 10.0kb upstream 10.0kb upstream 10000 false Chr19: 9383817-9393816 Glycine max
Glyma.19G055800 10.0kb downstream 10.0kb downstream 12118 true Chr19: 9371699-9383816 Glycine max
Glyma.19G055800 10.0kb downstream 10.0kb downstream 10000 false Chr19: 9371699-9381698 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310691 5265 Fabidae View MSA
124067578 5270 Rosid View MSA
123746258 5271 Pentapetalae View MSA
122791607 5272 Eudicot View MSA
122049522 5273 Angiosperm View MSA
123429079 5275 Viridiplantae View MSA
121351179 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0155804 0.0 0.0704625 Low Low
cufflinks 0.323121 0.0 1.23042    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 5.52205 0.0 16.3075    
cufflinks 24.6367 0.0 65.7515 High High
cufflinks 0.0136702 0.0 0.0626124 Low Low
cufflinks 0.0443347 0.0 0.183601 Low  
cufflinks 3.8701 0.0 11.9554    
cufflinks 0.33        
cufflinks 0.156        
cufflinks 0.008     Low Low
cufflinks 10.675     High High
cufflinks 3.656       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.113        
cufflinks 0.165        
cufflinks 0.041     Low  
cufflinks 0.217        
cufflinks 0.092     Low  
cufflinks 0.194        
cufflinks 0.086     Low  
cufflinks 0.034     Low  
cufflinks 0.036     Low  
cufflinks 0.127        
cufflinks 0.306        

0 Strain