Gene : Glyma.19G055900 G. max Wm82.a2.v1
Defline:  (1 of 2) KOG3038 - Histone acetyltransferase SAGA associated factor SGF29 Genomic Order:  559
Name:  ? Glyma.19G055900 Secondary Identifier:  ? PAC:30512600
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G055900 0.5kb upstream 0.5kb upstream 7023 true Chr19: 9590002-9597024 Glycine max
Glyma.19G055900 0.5kb upstream 0.5kb upstream 500 false Chr19: 9596525-9597024 Glycine max
Glyma.19G055900 0.5kb downstream 0.5kb downstream 7023 true Chr19: 9589502-9596524 Glycine max
Glyma.19G055900 0.5kb downstream 0.5kb downstream 500 false Chr19: 9589502-9590001 Glycine max
Glyma.19G055900 1.0kb upstream 1.0kb upstream 7523 true Chr19: 9590002-9597524 Glycine max
Glyma.19G055900 1.0kb upstream 1.0kb upstream 1000 false Chr19: 9596525-9597524 Glycine max
Glyma.19G055900 1.0kb downstream 1.0kb downstream 7523 true Chr19: 9589002-9596524 Glycine max
Glyma.19G055900 1.0kb downstream 1.0kb downstream 1000 false Chr19: 9589002-9590001 Glycine max
Glyma.19G055900 2.0kb upstream 2.0kb upstream 8523 true Chr19: 9590002-9598524 Glycine max
Glyma.19G055900 2.0kb upstream 2.0kb upstream 2000 false Chr19: 9596525-9598524 Glycine max
Glyma.19G055900 2.0kb downstream 2.0kb downstream 8523 true Chr19: 9588002-9596524 Glycine max
Glyma.19G055900 2.0kb downstream 2.0kb downstream 2000 false Chr19: 9588002-9590001 Glycine max
Glyma.19G055900 5.0kb upstream 5.0kb upstream 11523 true Chr19: 9590002-9601524 Glycine max
Glyma.19G055900 5.0kb upstream 5.0kb upstream 5000 false Chr19: 9596525-9601524 Glycine max
Glyma.19G055900 5.0kb downstream 5.0kb downstream 11523 true Chr19: 9585002-9596524 Glycine max
Glyma.19G055900 5.0kb downstream 5.0kb downstream 5000 false Chr19: 9585002-9590001 Glycine max
Glyma.19G055900 10.0kb upstream 10.0kb upstream 16523 true Chr19: 9590002-9606524 Glycine max
Glyma.19G055900 10.0kb upstream 10.0kb upstream 10000 false Chr19: 9596525-9606524 Glycine max
Glyma.19G055900 10.0kb downstream 10.0kb downstream 16523 true Chr19: 9580002-9596524 Glycine max
Glyma.19G055900 10.0kb downstream 10.0kb downstream 10000 false Chr19: 9580002-9590001 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306199 5265 Fabidae View MSA
124061243 5270 Rosid View MSA
123747151 5271 Pentapetalae View MSA
122789901 5272 Eudicot View MSA
122042873 5273 Angiosperm View MSA
121345271 5274 Embryophyte View MSA
123380184 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.60936 0.0 36.2314   Low
cufflinks 14.6843 0.0 64.3148    
cufflinks 12.9445 0.0 58.0467    
cufflinks 15.9016 0.0 69.4455   High
cufflinks 6.35292 0.0 31.1684   Low
cufflinks 9.233 0.0 45.4875    
cufflinks 11.8214 0.0 56.1931    
cufflinks 14.7435 0.0 64.4162    
cufflinks 9.01845 0.0 44.0617    
cufflinks 0.326        
cufflinks 0.271        
cufflinks 0.485        
cufflinks 0.25        
cufflinks 0.242        
cufflinks 0.236        
cufflinks 0.432        
cufflinks 0.124       Low
cufflinks 0.552       High
cufflinks 0.457        
cufflinks 0.509       High
cufflinks 0.249        
cufflinks 0.486        
cufflinks 0.301        
cufflinks 0.265        
cufflinks 0.521       High
cufflinks 0.237        

0 Strain