Gene : Glyma.02G306700 G. max Wm82.a2.v1
Defline:  (1 of 17) KOG4205 - RNA-binding protein musashi/mRNA cleavage and polyadenylation factor I complex, subunit HRP1 Genomic Order:  3067
Name:  ? Glyma.02G306700 Secondary Identifier:  ? PAC:30508910
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G306700 0.5kb upstream 0.5kb upstream 6650 true Chr02: 48124352-48131001 Glycine max
Glyma.02G306700 0.5kb upstream 0.5kb upstream 500 false Chr02: 48124352-48124851 Glycine max
Glyma.02G306700 0.5kb downstream 0.5kb downstream 6650 true Chr02: 48124852-48131501 Glycine max
Glyma.02G306700 0.5kb downstream 0.5kb downstream 500 false Chr02: 48131002-48131501 Glycine max
Glyma.02G306700 1.0kb upstream 1.0kb upstream 7150 true Chr02: 48123852-48131001 Glycine max
Glyma.02G306700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 48123852-48124851 Glycine max
Glyma.02G306700 1.0kb downstream 1.0kb downstream 7150 true Chr02: 48124852-48132001 Glycine max
Glyma.02G306700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 48131002-48132001 Glycine max
Glyma.02G306700 2.0kb upstream 2.0kb upstream 8150 true Chr02: 48122852-48131001 Glycine max
Glyma.02G306700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 48122852-48124851 Glycine max
Glyma.02G306700 2.0kb downstream 2.0kb downstream 8150 true Chr02: 48124852-48133001 Glycine max
Glyma.02G306700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 48131002-48133001 Glycine max
Glyma.02G306700 5.0kb upstream 5.0kb upstream 11150 true Chr02: 48119852-48131001 Glycine max
Glyma.02G306700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 48119852-48124851 Glycine max
Glyma.02G306700 5.0kb downstream 5.0kb downstream 11150 true Chr02: 48124852-48136001 Glycine max
Glyma.02G306700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 48131002-48136001 Glycine max
Glyma.02G306700 10.0kb upstream 10.0kb upstream 16150 true Chr02: 48114852-48131001 Glycine max
Glyma.02G306700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 48114852-48124851 Glycine max
Glyma.02G306700 10.0kb downstream 10.0kb downstream 16150 true Chr02: 48124852-48141001 Glycine max
Glyma.02G306700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 48131002-48141001 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306804 5265 Fabidae View MSA
124070648 5270 Rosid View MSA
123749642 5271 Pentapetalae View MSA
122786461 5272 Eudicot View MSA
122044662 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349165 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.2268 0.0 22.8169    
cufflinks 7.16387 0.0 25.5995    
cufflinks 2.54607 0.0 10.0133   Low
cufflinks 8.96722 0.0 31.2856    
cufflinks 14.5226 0.0 49.9358   High
cufflinks 11.2782 0.0 38.683    
cufflinks 8.41019 0.0 29.6179    
cufflinks 11.8369 0.0 40.6958    
cufflinks 7.2393 0.0 26.0271    
cufflinks 3.995       High
cufflinks 0.884        
cufflinks 1.397        
cufflinks 4.462       High
cufflinks 6.165       High
cufflinks 0.36       Low
cufflinks 1.25        
cufflinks 1.414        
cufflinks 2.238        
cufflinks 2.283        
cufflinks 1.089        
cufflinks 1.194        
cufflinks 1.144        
cufflinks 1.372        
cufflinks 1.476        
cufflinks 1.087        
cufflinks 1.451        

0 Strain