Gene : Glyma.03G000900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR36310:SF1 - T6D22.11 Genomic Order:  9
Name:  ? Glyma.03G000900 Secondary Identifier:  ? PAC:30515761
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G000900 0.5kb upstream 0.5kb upstream 1736 true Chr03: 117327-119062 Glycine max
Glyma.03G000900 0.5kb upstream 0.5kb upstream 500 false Chr03: 118563-119062 Glycine max
Glyma.03G000900 0.5kb downstream 0.5kb downstream 1736 true Chr03: 116827-118562 Glycine max
Glyma.03G000900 0.5kb downstream 0.5kb downstream 500 false Chr03: 116827-117326 Glycine max
Glyma.03G000900 1.0kb upstream 1.0kb upstream 2236 true Chr03: 117327-119562 Glycine max
Glyma.03G000900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 118563-119562 Glycine max
Glyma.03G000900 1.0kb downstream 1.0kb downstream 2236 true Chr03: 116327-118562 Glycine max
Glyma.03G000900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 116327-117326 Glycine max
Glyma.03G000900 2.0kb upstream 2.0kb upstream 3236 true Chr03: 117327-120562 Glycine max
Glyma.03G000900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 118563-120562 Glycine max
Glyma.03G000900 2.0kb downstream 2.0kb downstream 3236 true Chr03: 115327-118562 Glycine max
Glyma.03G000900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 115327-117326 Glycine max
Glyma.03G000900 5.0kb upstream 5.0kb upstream 6236 true Chr03: 117327-123562 Glycine max
Glyma.03G000900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 118563-123562 Glycine max
Glyma.03G000900 5.0kb downstream 5.0kb downstream 6236 true Chr03: 112327-118562 Glycine max
Glyma.03G000900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 112327-117326 Glycine max
Glyma.03G000900 10.0kb upstream 10.0kb upstream 11236 true Chr03: 117327-128562 Glycine max
Glyma.03G000900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 118563-128562 Glycine max
Glyma.03G000900 10.0kb downstream 10.0kb downstream 11236 true Chr03: 107327-118562 Glycine max
Glyma.03G000900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 107327-117326 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028589 5273 Angiosperm View MSA
122299189 5265 Fabidae View MSA
124070165 5270 Rosid View MSA
123747367 5271 Pentapetalae View MSA
122797380 5272 Eudicot View MSA
121298053 5274 Embryophyte View MSA
123336056 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.66055 0.0 30.0804    
cufflinks 7.12091 0.0 31.0999   High
cufflinks 5.19646 0.0 24.4485    
cufflinks 4.83836 0.0 25.0878    
cufflinks 3.63881 0.0 13.7811    
cufflinks 1.62675 0.0 7.36638   Low
cufflinks 5.92685 0.0 27.713    
cufflinks 4.33869 0.0 22.712    
cufflinks 3.60782 0.0 13.6217    
cufflinks 0.542       Low
cufflinks 0.44       Low
cufflinks 1.931        
cufflinks 0.633        
cufflinks 0.6        
cufflinks 1.205        
cufflinks 1.654        
cufflinks 0.487       Low
cufflinks 2.41       High
cufflinks 1.954        
cufflinks 1.857        
cufflinks 0.467       Low
cufflinks 2.181       High
cufflinks 2.06       High
cufflinks 0.765        
cufflinks 1.816        
cufflinks 0.55        

0 Strain