Gene : Glyma.02G311800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR24349:SF83 - CALCIUM-DEPENDENT PROTEIN KINASE 6 Genomic Order:  3118
Name:  ? Glyma.02G311800 Secondary Identifier:  ? PAC:30511157
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G311800 0.5kb upstream 0.5kb upstream 6988 true Chr02: 48508255-48515242 Glycine max
Glyma.02G311800 0.5kb upstream 0.5kb upstream 500 false Chr02: 48508255-48508754 Glycine max
Glyma.02G311800 0.5kb downstream 0.5kb downstream 6988 true Chr02: 48508755-48515742 Glycine max
Glyma.02G311800 0.5kb downstream 0.5kb downstream 500 false Chr02: 48515243-48515742 Glycine max
Glyma.02G311800 1.0kb upstream 1.0kb upstream 7488 true Chr02: 48507755-48515242 Glycine max
Glyma.02G311800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 48507755-48508754 Glycine max
Glyma.02G311800 1.0kb downstream 1.0kb downstream 7488 true Chr02: 48508755-48516242 Glycine max
Glyma.02G311800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 48515243-48516242 Glycine max
Glyma.02G311800 2.0kb upstream 2.0kb upstream 8488 true Chr02: 48506755-48515242 Glycine max
Glyma.02G311800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 48506755-48508754 Glycine max
Glyma.02G311800 2.0kb downstream 2.0kb downstream 8488 true Chr02: 48508755-48517242 Glycine max
Glyma.02G311800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 48515243-48517242 Glycine max
Glyma.02G311800 5.0kb upstream 5.0kb upstream 11488 true Chr02: 48503755-48515242 Glycine max
Glyma.02G311800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 48503755-48508754 Glycine max
Glyma.02G311800 5.0kb downstream 5.0kb downstream 11488 true Chr02: 48508755-48520242 Glycine max
Glyma.02G311800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 48515243-48520242 Glycine max
Glyma.02G311800 10.0kb upstream 10.0kb upstream 16488 true Chr02: 48498755-48515242 Glycine max
Glyma.02G311800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 48498755-48508754 Glycine max
Glyma.02G311800 10.0kb downstream 10.0kb downstream 16488 true Chr02: 48508755-48525242 Glycine max
Glyma.02G311800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 48515243-48525242 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122241402 5265 Fabidae Singleton cluster - no MSA
124064414 5270 Rosid View MSA
123746824 5271 Pentapetalae View MSA
122786151 5272 Eudicot View MSA
122046478 5273 Angiosperm View MSA
121350946 5274 Embryophyte View MSA
123428456 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.1569 0.0 77.3685 High  
cufflinks 11.534 0.0 30.8097   Low
cufflinks 21.9544 0.0 59.3926 High  
cufflinks 14.2031 0.0 37.9008    
cufflinks 26.8614 0.0 73.5456 High  
cufflinks 43.1633 0.0 124.203 High High
cufflinks 13.2855 0.0 35.4444   Low
cufflinks 21.8846 0.0 59.1653 High  
cufflinks 23.9004 0.0 64.9305 High  
cufflinks 13.526     High  
cufflinks 16.019     High High
cufflinks 7.785     High  
cufflinks 13.312     High  
cufflinks 10.689     High  
cufflinks 13.107     High  
cufflinks 8.814     High  
cufflinks 19.193     High High
cufflinks 5.381       Low
cufflinks 6.274       Low
cufflinks 6.369       Low
cufflinks 14.555     High  
cufflinks 7.51     High  
cufflinks 6.818        
cufflinks 17.893     High High
cufflinks 6.438       Low
cufflinks 18.165     High High

0 Strain