Gene : Glyma.03G021000 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR24096:SF190 - EBONY Genomic Order:  210
Name:  ? Glyma.03G021000 Secondary Identifier:  ? PAC:30516798
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax LYSINE-DEG1-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G021000 0.5kb upstream 0.5kb upstream 15157 true Chr03: 2148298-2163454 Glycine max
Glyma.03G021000 0.5kb upstream 0.5kb upstream 500 false Chr03: 2162955-2163454 Glycine max
Glyma.03G021000 0.5kb downstream 0.5kb downstream 15157 true Chr03: 2147798-2162954 Glycine max
Glyma.03G021000 0.5kb downstream 0.5kb downstream 500 false Chr03: 2147798-2148297 Glycine max
Glyma.03G021000 1.0kb upstream 1.0kb upstream 15657 true Chr03: 2148298-2163954 Glycine max
Glyma.03G021000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 2162955-2163954 Glycine max
Glyma.03G021000 1.0kb downstream 1.0kb downstream 15657 true Chr03: 2147298-2162954 Glycine max
Glyma.03G021000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 2147298-2148297 Glycine max
Glyma.03G021000 2.0kb upstream 2.0kb upstream 16657 true Chr03: 2148298-2164954 Glycine max
Glyma.03G021000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 2162955-2164954 Glycine max
Glyma.03G021000 2.0kb downstream 2.0kb downstream 16657 true Chr03: 2146298-2162954 Glycine max
Glyma.03G021000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 2146298-2148297 Glycine max
Glyma.03G021000 5.0kb upstream 5.0kb upstream 19657 true Chr03: 2148298-2167954 Glycine max
Glyma.03G021000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 2162955-2167954 Glycine max
Glyma.03G021000 5.0kb downstream 5.0kb downstream 19657 true Chr03: 2143298-2162954 Glycine max
Glyma.03G021000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 2143298-2148297 Glycine max
Glyma.03G021000 10.0kb upstream 10.0kb upstream 24657 true Chr03: 2148298-2172954 Glycine max
Glyma.03G021000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 2162955-2172954 Glycine max
Glyma.03G021000 10.0kb downstream 10.0kb downstream 24657 true Chr03: 2138298-2162954 Glycine max
Glyma.03G021000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 2138298-2148297 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301954 5265 Fabidae View MSA
124050349 5270 Rosid View MSA
123736746 5271 Pentapetalae View MSA
122793202 5272 Eudicot View MSA
122047218 5273 Angiosperm View MSA
121345046 5274 Embryophyte View MSA
123425856 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.26408 0.0 13.993    
cufflinks 3.08167 0.0 17.6525    
cufflinks 3.88465 0.0 25.0575   High
cufflinks 2.63098 0.0 15.3299    
cufflinks 1.83128 0.0 14.3924   Low
cufflinks 1.80141 0.0 14.7142   Low
cufflinks 2.65361 0.0 17.466    
cufflinks 2.02896 0.0 16.4265    
cufflinks 2.35781 0.0 13.0828    
cufflinks 0.062     Low  
cufflinks 0.048     Low Low
cufflinks 0.169       High
cufflinks 0.075     Low  
cufflinks 0.064     Low  
cufflinks 0.079        
cufflinks 0.14        
cufflinks 0.077        
cufflinks 0.182       High
cufflinks 0.149        
cufflinks 0.162       High
cufflinks 0.054     Low Low
cufflinks 0.177       High
cufflinks 0.136        
cufflinks 0.057     Low Low
cufflinks 0.171       High
cufflinks 0.052     Low Low

0 Strain