Gene : Glyma.03G010800 G. max Wm82.a2.v1
Defline:  (1 of 2) PF01062 - Bestrophin, RFP-TM, chloride channel (Bestrophin) Genomic Order:  108
Name:  ? Glyma.03G010800 Secondary Identifier:  ? PAC:30518797
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G010800 0.5kb upstream 0.5kb upstream 3896 true Chr03: 1043257-1047152 Glycine max
Glyma.03G010800 0.5kb upstream 0.5kb upstream 500 false Chr03: 1046653-1047152 Glycine max
Glyma.03G010800 0.5kb downstream 0.5kb downstream 3896 true Chr03: 1042757-1046652 Glycine max
Glyma.03G010800 0.5kb downstream 0.5kb downstream 500 false Chr03: 1042757-1043256 Glycine max
Glyma.03G010800 1.0kb upstream 1.0kb upstream 4396 true Chr03: 1043257-1047652 Glycine max
Glyma.03G010800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 1046653-1047652 Glycine max
Glyma.03G010800 1.0kb downstream 1.0kb downstream 4396 true Chr03: 1042257-1046652 Glycine max
Glyma.03G010800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 1042257-1043256 Glycine max
Glyma.03G010800 2.0kb upstream 2.0kb upstream 5396 true Chr03: 1043257-1048652 Glycine max
Glyma.03G010800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 1046653-1048652 Glycine max
Glyma.03G010800 2.0kb downstream 2.0kb downstream 5396 true Chr03: 1041257-1046652 Glycine max
Glyma.03G010800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 1041257-1043256 Glycine max
Glyma.03G010800 5.0kb upstream 5.0kb upstream 8396 true Chr03: 1043257-1051652 Glycine max
Glyma.03G010800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 1046653-1051652 Glycine max
Glyma.03G010800 5.0kb downstream 5.0kb downstream 8396 true Chr03: 1038257-1046652 Glycine max
Glyma.03G010800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 1038257-1043256 Glycine max
Glyma.03G010800 10.0kb upstream 10.0kb upstream 13396 true Chr03: 1043257-1056652 Glycine max
Glyma.03G010800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 1046653-1056652 Glycine max
Glyma.03G010800 10.0kb downstream 10.0kb downstream 13396 true Chr03: 1033257-1046652 Glycine max
Glyma.03G010800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 1033257-1043256 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300742 5265 Fabidae View MSA
124066850 5270 Rosid View MSA
123736824 5271 Pentapetalae View MSA
122787113 5272 Eudicot View MSA
122051206 5273 Angiosperm View MSA
121349752 5274 Embryophyte View MSA
123427884 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.85345 0.0 24.2874   High
cufflinks 3.91806 0.0 16.2837    
cufflinks 3.65006 0.0 15.831    
cufflinks 3.43086 0.0 14.7681    
cufflinks 2.00805 0.0 10.3294    
cufflinks 1.05841 0.0 4.64485   Low
cufflinks 3.35892 0.0 14.2505    
cufflinks 2.9192 0.0 13.1424    
cufflinks 1.64144 0.0 6.40009   Low
cufflinks 0.555        
cufflinks 0.06       Low
cufflinks 0.643        
cufflinks 0.219        
cufflinks 0.246        
cufflinks 0.197        
cufflinks 0.849        
cufflinks 0.308        
cufflinks 0.613        
cufflinks 1.497       High
cufflinks 0.883        
cufflinks 0.111       Low
cufflinks 0.913        
cufflinks 1.154       High
cufflinks 0.14       Low
cufflinks 0.871        
cufflinks 0.206        

0 Strain