Gene : Glyma.19G057200 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11122:SF21 - ALDOSE 1-EPIMERASE FAMILY PROTEIN-RELATED Genomic Order:  572
Name:  ? Glyma.19G057200 Secondary Identifier:  ? PAC:30511537
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G057200 0.5kb upstream 0.5kb upstream 4285 true Chr19: 10535284-10539568 Glycine max
Glyma.19G057200 0.5kb upstream 0.5kb upstream 500 false Chr19: 10539069-10539568 Glycine max
Glyma.19G057200 0.5kb downstream 0.5kb downstream 4285 true Chr19: 10534784-10539068 Glycine max
Glyma.19G057200 0.5kb downstream 0.5kb downstream 500 false Chr19: 10534784-10535283 Glycine max
Glyma.19G057200 1.0kb upstream 1.0kb upstream 4785 true Chr19: 10535284-10540068 Glycine max
Glyma.19G057200 1.0kb upstream 1.0kb upstream 1000 false Chr19: 10539069-10540068 Glycine max
Glyma.19G057200 1.0kb downstream 1.0kb downstream 4785 true Chr19: 10534284-10539068 Glycine max
Glyma.19G057200 1.0kb downstream 1.0kb downstream 1000 false Chr19: 10534284-10535283 Glycine max
Glyma.19G057200 2.0kb upstream 2.0kb upstream 5785 true Chr19: 10535284-10541068 Glycine max
Glyma.19G057200 2.0kb upstream 2.0kb upstream 2000 false Chr19: 10539069-10541068 Glycine max
Glyma.19G057200 2.0kb downstream 2.0kb downstream 5785 true Chr19: 10533284-10539068 Glycine max
Glyma.19G057200 2.0kb downstream 2.0kb downstream 2000 false Chr19: 10533284-10535283 Glycine max
Glyma.19G057200 5.0kb upstream 5.0kb upstream 8785 true Chr19: 10535284-10544068 Glycine max
Glyma.19G057200 5.0kb upstream 5.0kb upstream 5000 false Chr19: 10539069-10544068 Glycine max
Glyma.19G057200 5.0kb downstream 5.0kb downstream 8785 true Chr19: 10530284-10539068 Glycine max
Glyma.19G057200 5.0kb downstream 5.0kb downstream 5000 false Chr19: 10530284-10535283 Glycine max
Glyma.19G057200 10.0kb upstream 10.0kb upstream 13785 true Chr19: 10535284-10549068 Glycine max
Glyma.19G057200 10.0kb upstream 10.0kb upstream 10000 false Chr19: 10539069-10549068 Glycine max
Glyma.19G057200 10.0kb downstream 10.0kb downstream 13785 true Chr19: 10525284-10539068 Glycine max
Glyma.19G057200 10.0kb downstream 10.0kb downstream 10000 false Chr19: 10525284-10535283 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308519 5265 Fabidae View MSA
124066118 5270 Rosid View MSA
123736939 5271 Pentapetalae View MSA
122788781 5272 Eudicot View MSA
122046628 5273 Angiosperm View MSA
121310634 5274 Embryophyte View MSA
123428689 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.864 0.0 3.8767    
cufflinks 0.539933 0.0 3.51042    
cufflinks 2.40518 0.0 11.5456    
cufflinks 7.50492 0.0 24.7111   High
cufflinks 1.74212 0.0 6.75731    
cufflinks 0.229365 0.0 1.14555 Low Low
cufflinks 1.60356 0.0 8.58932    
cufflinks 1.93308 0.0 7.07682    
cufflinks 4.34826 0.0 16.5977    
cufflinks 0.786        
cufflinks 0.47        
cufflinks 0.929       High
cufflinks 0.539        
cufflinks 0.095       Low
cufflinks 0.968       High
cufflinks 0.212        
cufflinks 0.728        
cufflinks 1.609       High
cufflinks 0.175       Low
cufflinks 0.203        
cufflinks 0.434        
cufflinks 0.231        
cufflinks 0.184       Low
cufflinks 0.496        
cufflinks 0.24        
cufflinks 0.515        

0 Strain