Gene : Glyma.03G016600 G. max Wm82.a2.v1
Defline:  (1 of 30) PF00046//PF01852 - Homeobox domain (Homeobox) // START domain (START) Genomic Order:  166
Name:  ? Glyma.03G016600 Secondary Identifier:  ? PAC:30517573
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G016600 0.5kb upstream 0.5kb upstream 8563 true Chr03: 1628243-1636805 Glycine max
Glyma.03G016600 0.5kb upstream 0.5kb upstream 500 false Chr03: 1636306-1636805 Glycine max
Glyma.03G016600 0.5kb downstream 0.5kb downstream 8563 true Chr03: 1627743-1636305 Glycine max
Glyma.03G016600 0.5kb downstream 0.5kb downstream 500 false Chr03: 1627743-1628242 Glycine max
Glyma.03G016600 1.0kb upstream 1.0kb upstream 9063 true Chr03: 1628243-1637305 Glycine max
Glyma.03G016600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 1636306-1637305 Glycine max
Glyma.03G016600 1.0kb downstream 1.0kb downstream 9063 true Chr03: 1627243-1636305 Glycine max
Glyma.03G016600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 1627243-1628242 Glycine max
Glyma.03G016600 2.0kb upstream 2.0kb upstream 10063 true Chr03: 1628243-1638305 Glycine max
Glyma.03G016600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 1636306-1638305 Glycine max
Glyma.03G016600 2.0kb downstream 2.0kb downstream 10063 true Chr03: 1626243-1636305 Glycine max
Glyma.03G016600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 1626243-1628242 Glycine max
Glyma.03G016600 5.0kb upstream 5.0kb upstream 13063 true Chr03: 1628243-1641305 Glycine max
Glyma.03G016600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 1636306-1641305 Glycine max
Glyma.03G016600 5.0kb downstream 5.0kb downstream 13063 true Chr03: 1623243-1636305 Glycine max
Glyma.03G016600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 1623243-1628242 Glycine max
Glyma.03G016600 10.0kb upstream 10.0kb upstream 18063 true Chr03: 1628243-1646305 Glycine max
Glyma.03G016600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 1636306-1646305 Glycine max
Glyma.03G016600 10.0kb downstream 10.0kb downstream 18063 true Chr03: 1618243-1636305 Glycine max
Glyma.03G016600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 1618243-1628242 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312921 5265 Fabidae View MSA
124063291 5270 Rosid View MSA
123740352 5271 Pentapetalae View MSA
122790073 5272 Eudicot View MSA
122048483 5273 Angiosperm View MSA
121350910 5274 Embryophyte View MSA
123381934 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.33256 0.0 31.7684    
cufflinks 10.6773 0.0 49.7829   High
cufflinks 2.20613 0.0 8.21074    
cufflinks 5.62011 0.0 31.2502    
cufflinks 1.65461 0.0 9.18358    
cufflinks 2.54299 0.0 9.41567    
cufflinks 4.82513 0.0 19.4401    
cufflinks 1.44732 0.0 7.13817    
cufflinks 0.229066 0.0 1.11016 Low Low
cufflinks 0.085     Low  
cufflinks 0.003     Low Low
cufflinks 0.23        
cufflinks 0.075     Low  
cufflinks 0.102        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.758        
cufflinks 0.005     Low Low
cufflinks 0.307        
cufflinks 1.069       High
cufflinks 0.688        
cufflinks 0.001     Low Low
cufflinks 0.647        
cufflinks 0.54        
cufflinks 0.002     Low Low
cufflinks 0.627        
cufflinks 0.01     Low  

0 Strain