Gene : Glyma.03G035900 G. max Wm82.a2.v1
Defline:  (1 of 20) PF01823 - MAC/Perforin domain (MACPF) Genomic Order:  359
Name:  ? Glyma.03G035900 Secondary Identifier:  ? PAC:30515330
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G035900 0.5kb upstream 0.5kb upstream 7909 true Chr03: 4322884-4330792 Glycine max
Glyma.03G035900 0.5kb upstream 0.5kb upstream 500 false Chr03: 4330293-4330792 Glycine max
Glyma.03G035900 0.5kb downstream 0.5kb downstream 7909 true Chr03: 4322384-4330292 Glycine max
Glyma.03G035900 0.5kb downstream 0.5kb downstream 500 false Chr03: 4322384-4322883 Glycine max
Glyma.03G035900 1.0kb upstream 1.0kb upstream 8409 true Chr03: 4322884-4331292 Glycine max
Glyma.03G035900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 4330293-4331292 Glycine max
Glyma.03G035900 1.0kb downstream 1.0kb downstream 8409 true Chr03: 4321884-4330292 Glycine max
Glyma.03G035900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 4321884-4322883 Glycine max
Glyma.03G035900 2.0kb upstream 2.0kb upstream 9409 true Chr03: 4322884-4332292 Glycine max
Glyma.03G035900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 4330293-4332292 Glycine max
Glyma.03G035900 2.0kb downstream 2.0kb downstream 9409 true Chr03: 4320884-4330292 Glycine max
Glyma.03G035900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 4320884-4322883 Glycine max
Glyma.03G035900 5.0kb upstream 5.0kb upstream 12409 true Chr03: 4322884-4335292 Glycine max
Glyma.03G035900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 4330293-4335292 Glycine max
Glyma.03G035900 5.0kb downstream 5.0kb downstream 12409 true Chr03: 4317884-4330292 Glycine max
Glyma.03G035900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 4317884-4322883 Glycine max
Glyma.03G035900 10.0kb upstream 10.0kb upstream 17409 true Chr03: 4322884-4340292 Glycine max
Glyma.03G035900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 4330293-4340292 Glycine max
Glyma.03G035900 10.0kb downstream 10.0kb downstream 17409 true Chr03: 4312884-4330292 Glycine max
Glyma.03G035900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 4312884-4322883 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301877 5265 Fabidae View MSA
124063432 5270 Rosid View MSA
123741533 5271 Pentapetalae View MSA
122797212 5272 Eudicot View MSA
122044022 5273 Angiosperm View MSA
121349025 5274 Embryophyte View MSA
123381129 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.45944 0.0 25.2989    
cufflinks 7.02852 0.0 19.0066    
cufflinks 7.08487 0.0 19.1238    
cufflinks 9.88127 0.0 26.3973   High
cufflinks 5.63277 0.0 15.4495   Low
cufflinks 10.0311 0.0 26.7929   High
cufflinks 8.1733 0.0 21.9566    
cufflinks 7.27285 0.0 19.6267    
cufflinks 6.59661 0.0 17.8976    
cufflinks 2.309        
cufflinks 2.47        
cufflinks 2.963        
cufflinks 2.404        
cufflinks 1.804       Low
cufflinks 1.521       Low
cufflinks 2.721        
cufflinks 3.979       High
cufflinks 2.838        
cufflinks 3.078        
cufflinks 2.549        
cufflinks 2.454        
cufflinks 2.72        
cufflinks 2.844        
cufflinks 2.849        
cufflinks 2.195        
cufflinks 2.836        

0 Strain