Gene : Glyma.03G049800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR32285:SF11 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 34 Genomic Order:  498
Name:  ? Glyma.03G049800 Secondary Identifier:  ? PAC:30516459
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G049800 0.5kb upstream 0.5kb upstream 4175 true Chr03: 6490354-6494528 Glycine max
Glyma.03G049800 0.5kb upstream 0.5kb upstream 500 false Chr03: 6494029-6494528 Glycine max
Glyma.03G049800 0.5kb downstream 0.5kb downstream 4175 true Chr03: 6489854-6494028 Glycine max
Glyma.03G049800 0.5kb downstream 0.5kb downstream 500 false Chr03: 6489854-6490353 Glycine max
Glyma.03G049800 1.0kb upstream 1.0kb upstream 4675 true Chr03: 6490354-6495028 Glycine max
Glyma.03G049800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 6494029-6495028 Glycine max
Glyma.03G049800 1.0kb downstream 1.0kb downstream 4675 true Chr03: 6489354-6494028 Glycine max
Glyma.03G049800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 6489354-6490353 Glycine max
Glyma.03G049800 2.0kb upstream 2.0kb upstream 5675 true Chr03: 6490354-6496028 Glycine max
Glyma.03G049800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 6494029-6496028 Glycine max
Glyma.03G049800 2.0kb downstream 2.0kb downstream 5675 true Chr03: 6488354-6494028 Glycine max
Glyma.03G049800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 6488354-6490353 Glycine max
Glyma.03G049800 5.0kb upstream 5.0kb upstream 8675 true Chr03: 6490354-6499028 Glycine max
Glyma.03G049800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 6494029-6499028 Glycine max
Glyma.03G049800 5.0kb downstream 5.0kb downstream 8675 true Chr03: 6485354-6494028 Glycine max
Glyma.03G049800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 6485354-6490353 Glycine max
Glyma.03G049800 10.0kb upstream 10.0kb upstream 13675 true Chr03: 6490354-6504028 Glycine max
Glyma.03G049800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 6494029-6504028 Glycine max
Glyma.03G049800 10.0kb downstream 10.0kb downstream 13675 true Chr03: 6480354-6494028 Glycine max
Glyma.03G049800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 6480354-6490353 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309818 5265 Fabidae View MSA
124069147 5270 Rosid View MSA
123738622 5271 Pentapetalae View MSA
122795590 5272 Eudicot View MSA
122045837 5273 Angiosperm View MSA
121310513 5274 Embryophyte View MSA
123347976 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.37878 0.0 5.82897    
cufflinks 0.667466 0.0 4.07403    
cufflinks 0.620328 0.0 2.87958    
cufflinks 12.0896 0.0 50.8754   High
cufflinks 1.88197 0.0 7.08332    
cufflinks 0.628488 0.0 2.97261    
cufflinks 0.0150154 0.0 0.0824128 Low Low
cufflinks 18.5499 0.0 74.8257   High
cufflinks 3.91191 0.0 12.0158    
cufflinks 1.557       High
cufflinks 0.049     Low Low
cufflinks 0.076     Low  
cufflinks 0.563       High
cufflinks 0.027     Low Low
cufflinks 0.021     Low Low
cufflinks 0.294        
cufflinks 0.663       High
cufflinks 0.165        
cufflinks 0.301        
cufflinks 0.312        
cufflinks 0.101        
cufflinks 0.419        
cufflinks 0.187        
cufflinks 0.094        
cufflinks 0.345        
cufflinks 0.132        

0 Strain