Gene : Glyma.03G028900 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR31707:SF35 - PECTINESTERASE/PECTINESTERASE INHIBITOR 36-RELATED Genomic Order:  289
Name:  ? Glyma.03G028900 Secondary Identifier:  ? PAC:30516283
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-1081 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G028900 0.5kb upstream 0.5kb upstream 4716 true Chr03: 3148672-3153387 Glycine max
Glyma.03G028900 0.5kb upstream 0.5kb upstream 500 false Chr03: 3152888-3153387 Glycine max
Glyma.03G028900 0.5kb downstream 0.5kb downstream 4716 true Chr03: 3148172-3152887 Glycine max
Glyma.03G028900 0.5kb downstream 0.5kb downstream 500 false Chr03: 3148172-3148671 Glycine max
Glyma.03G028900 1.0kb upstream 1.0kb upstream 5216 true Chr03: 3148672-3153887 Glycine max
Glyma.03G028900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 3152888-3153887 Glycine max
Glyma.03G028900 1.0kb downstream 1.0kb downstream 5216 true Chr03: 3147672-3152887 Glycine max
Glyma.03G028900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 3147672-3148671 Glycine max
Glyma.03G028900 2.0kb upstream 2.0kb upstream 6216 true Chr03: 3148672-3154887 Glycine max
Glyma.03G028900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 3152888-3154887 Glycine max
Glyma.03G028900 2.0kb downstream 2.0kb downstream 6216 true Chr03: 3146672-3152887 Glycine max
Glyma.03G028900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 3146672-3148671 Glycine max
Glyma.03G028900 5.0kb upstream 5.0kb upstream 9216 true Chr03: 3148672-3157887 Glycine max
Glyma.03G028900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 3152888-3157887 Glycine max
Glyma.03G028900 5.0kb downstream 5.0kb downstream 9216 true Chr03: 3143672-3152887 Glycine max
Glyma.03G028900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 3143672-3148671 Glycine max
Glyma.03G028900 10.0kb upstream 10.0kb upstream 14216 true Chr03: 3148672-3162887 Glycine max
Glyma.03G028900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 3152888-3162887 Glycine max
Glyma.03G028900 10.0kb downstream 10.0kb downstream 14216 true Chr03: 3138672-3152887 Glycine max
Glyma.03G028900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 3138672-3148671 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301633 5265 Fabidae View MSA
124073271 5270 Rosid View MSA
123752785 5271 Pentapetalae View MSA
122796250 5272 Eudicot View MSA
122050958 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.04981 0.0 3.66138   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0862092 0.0 0.342082 Low  
cufflinks 0.0209487 0.0 0.0897761 Low  
cufflinks 0.145655 0.0 0.566524 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0224478 0.0 0.0956695 Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.924        
cufflinks 0.016     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 6.768       High
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain