Gene : Glyma.03G070200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11624:SF21 - 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT BETA, MITOCHONDRIAL Genomic Order:  702
Name:  ? Glyma.03G070200 Secondary Identifier:  ? PAC:30516857
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5046 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G070200 0.5kb upstream 0.5kb upstream 7116 true Chr03: 16215981-16223096 Glycine max
Glyma.03G070200 0.5kb upstream 0.5kb upstream 500 false Chr03: 16222597-16223096 Glycine max
Glyma.03G070200 0.5kb downstream 0.5kb downstream 7116 true Chr03: 16215481-16222596 Glycine max
Glyma.03G070200 0.5kb downstream 0.5kb downstream 500 false Chr03: 16215481-16215980 Glycine max
Glyma.03G070200 1.0kb upstream 1.0kb upstream 7616 true Chr03: 16215981-16223596 Glycine max
Glyma.03G070200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 16222597-16223596 Glycine max
Glyma.03G070200 1.0kb downstream 1.0kb downstream 7616 true Chr03: 16214981-16222596 Glycine max
Glyma.03G070200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 16214981-16215980 Glycine max
Glyma.03G070200 2.0kb upstream 2.0kb upstream 8616 true Chr03: 16215981-16224596 Glycine max
Glyma.03G070200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 16222597-16224596 Glycine max
Glyma.03G070200 2.0kb downstream 2.0kb downstream 8616 true Chr03: 16213981-16222596 Glycine max
Glyma.03G070200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 16213981-16215980 Glycine max
Glyma.03G070200 5.0kb upstream 5.0kb upstream 11616 true Chr03: 16215981-16227596 Glycine max
Glyma.03G070200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 16222597-16227596 Glycine max
Glyma.03G070200 5.0kb downstream 5.0kb downstream 11616 true Chr03: 16210981-16222596 Glycine max
Glyma.03G070200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 16210981-16215980 Glycine max
Glyma.03G070200 10.0kb upstream 10.0kb upstream 16616 true Chr03: 16215981-16232596 Glycine max
Glyma.03G070200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 16222597-16232596 Glycine max
Glyma.03G070200 10.0kb downstream 10.0kb downstream 16616 true Chr03: 16205981-16222596 Glycine max
Glyma.03G070200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 16205981-16215980 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309048 5265 Fabidae View MSA
124067270 5270 Rosid View MSA
123743874 5271 Pentapetalae View MSA
122787684 5272 Eudicot View MSA
122046166 5273 Angiosperm View MSA
121344271 5274 Embryophyte View MSA
123424966 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 60.4166 0.0 281.405 High High
cufflinks 22.6147 0.0 92.4947 High  
cufflinks 87.6325 0.0 420.182 High High
cufflinks 26.2852 0.0 104.391 High  
cufflinks 14.7621 0.0 59.8934    
cufflinks 27.3522 0.0 82.4968 High  
cufflinks 9.37291 0.0 40.0188   Low
cufflinks 33.0942 0.0 101.755 High  
cufflinks 21.0268 0.0 62.4246 High  
cufflinks 2.711       Low
cufflinks 14.703     High High
cufflinks 6.891        
cufflinks 2.37       Low
cufflinks 1.93       Low
cufflinks 13.434     High High
cufflinks 7.573     High  
cufflinks 2.203       Low
cufflinks 3.093        
cufflinks 3.215        
cufflinks 13.256     High High
cufflinks 8.312     High  
cufflinks 7.42     High  
cufflinks 3.212        
cufflinks 13.491     High High
cufflinks 12.258     High High
cufflinks 7.201     High  

0 Strain