Gene : Glyma.03G060300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED Genomic Order:  603
Name:  ? Glyma.03G060300 Secondary Identifier:  ? PAC:30516483
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G060300 0.5kb upstream 0.5kb upstream 2595 true Chr03: 8759185-8761779 Glycine max
Glyma.03G060300 0.5kb upstream 0.5kb upstream 500 false Chr03: 8759185-8759684 Glycine max
Glyma.03G060300 0.5kb downstream 0.5kb downstream 2595 true Chr03: 8759685-8762279 Glycine max
Glyma.03G060300 0.5kb downstream 0.5kb downstream 500 false Chr03: 8761780-8762279 Glycine max
Glyma.03G060300 1.0kb upstream 1.0kb upstream 3095 true Chr03: 8758685-8761779 Glycine max
Glyma.03G060300 1.0kb upstream 1.0kb upstream 1000 false Chr03: 8758685-8759684 Glycine max
Glyma.03G060300 1.0kb downstream 1.0kb downstream 3095 true Chr03: 8759685-8762779 Glycine max
Glyma.03G060300 1.0kb downstream 1.0kb downstream 1000 false Chr03: 8761780-8762779 Glycine max
Glyma.03G060300 2.0kb upstream 2.0kb upstream 4095 true Chr03: 8757685-8761779 Glycine max
Glyma.03G060300 2.0kb upstream 2.0kb upstream 2000 false Chr03: 8757685-8759684 Glycine max
Glyma.03G060300 2.0kb downstream 2.0kb downstream 4095 true Chr03: 8759685-8763779 Glycine max
Glyma.03G060300 2.0kb downstream 2.0kb downstream 2000 false Chr03: 8761780-8763779 Glycine max
Glyma.03G060300 5.0kb upstream 5.0kb upstream 7095 true Chr03: 8754685-8761779 Glycine max
Glyma.03G060300 5.0kb upstream 5.0kb upstream 5000 false Chr03: 8754685-8759684 Glycine max
Glyma.03G060300 5.0kb downstream 5.0kb downstream 7095 true Chr03: 8759685-8766779 Glycine max
Glyma.03G060300 5.0kb downstream 5.0kb downstream 5000 false Chr03: 8761780-8766779 Glycine max
Glyma.03G060300 10.0kb upstream 10.0kb upstream 12095 true Chr03: 8749685-8761779 Glycine max
Glyma.03G060300 10.0kb upstream 10.0kb upstream 10000 false Chr03: 8749685-8759684 Glycine max
Glyma.03G060300 10.0kb downstream 10.0kb downstream 12095 true Chr03: 8759685-8771779 Glycine max
Glyma.03G060300 10.0kb downstream 10.0kb downstream 10000 false Chr03: 8761780-8771779 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306293 5265 Fabidae View MSA
124062500 5270 Rosid View MSA
123736418 5271 Pentapetalae View MSA
122792192 5272 Eudicot View MSA
122044716 5273 Angiosperm View MSA
121345249 5274 Embryophyte View MSA
123428168 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 288.243 0.0 1080.15 High  
cufflinks 293.787 0.0 1091.33 High High
cufflinks 103.466 0.0 307.075 High  
cufflinks 189.001 0.0 631.903 High  
cufflinks 18.0333 0.0 48.2191   Low
cufflinks 17.8118 0.0 47.6871   Low
cufflinks 154.555 0.0 501.349 High  
cufflinks 132.134 0.0 412.316 High  
cufflinks 8.56302 0.0 24.0562   Low
cufflinks 127.7     High  
cufflinks 0.685        
cufflinks 89.674     High  
cufflinks 0.371       Low
cufflinks 0.18       Low
cufflinks 0.486        
cufflinks 449.488     High High
cufflinks 0.3       Low
cufflinks 77.52     High  
cufflinks 161.054     High  
cufflinks 498.404     High High
cufflinks 0.493        
cufflinks 488.02     High High
cufflinks 393.589     High High
cufflinks 1.044        
cufflinks 475.557     High High
cufflinks 0.239       Low

0 Strain