Gene : Glyma.19G061000 G. max Wm82.a2.v1
Defline:  (1 of 6) 2.3.1.41 - Beta-ketoacyl-[acyl-carrier-protein] synthase I / KAS I Genomic Order:  610
Name:  ? Glyma.19G061000 Secondary Identifier:  ? PAC:30513231
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax FASYN-ELONG-PWY Glycine max pathologic  
Gmax PWY-5156 Glycine max pathologic  
Gmax PWY-5971 Glycine max pathologic  
Gmax PWY-5989 Glycine max pathologic  
Gmax PWY-6282 Glycine max pathologic  
Gmax PWY-7388 Glycine max pathologic  
Gmax PWY-7663 Glycine max pathologic  

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G061000 0.5kb upstream 0.5kb upstream 2931 true Chr19: 12253832-12256762 Glycine max
Glyma.19G061000 0.5kb upstream 0.5kb upstream 500 false Chr19: 12253832-12254331 Glycine max
Glyma.19G061000 0.5kb downstream 0.5kb downstream 2931 true Chr19: 12254332-12257262 Glycine max
Glyma.19G061000 0.5kb downstream 0.5kb downstream 500 false Chr19: 12256763-12257262 Glycine max
Glyma.19G061000 1.0kb upstream 1.0kb upstream 3431 true Chr19: 12253332-12256762 Glycine max
Glyma.19G061000 1.0kb upstream 1.0kb upstream 1000 false Chr19: 12253332-12254331 Glycine max
Glyma.19G061000 1.0kb downstream 1.0kb downstream 3431 true Chr19: 12254332-12257762 Glycine max
Glyma.19G061000 1.0kb downstream 1.0kb downstream 1000 false Chr19: 12256763-12257762 Glycine max
Glyma.19G061000 2.0kb upstream 2.0kb upstream 4431 true Chr19: 12252332-12256762 Glycine max
Glyma.19G061000 2.0kb upstream 2.0kb upstream 2000 false Chr19: 12252332-12254331 Glycine max
Glyma.19G061000 2.0kb downstream 2.0kb downstream 4431 true Chr19: 12254332-12258762 Glycine max
Glyma.19G061000 2.0kb downstream 2.0kb downstream 2000 false Chr19: 12256763-12258762 Glycine max
Glyma.19G061000 5.0kb upstream 5.0kb upstream 7431 true Chr19: 12249332-12256762 Glycine max
Glyma.19G061000 5.0kb upstream 5.0kb upstream 5000 false Chr19: 12249332-12254331 Glycine max
Glyma.19G061000 5.0kb downstream 5.0kb downstream 7431 true Chr19: 12254332-12261762 Glycine max
Glyma.19G061000 5.0kb downstream 5.0kb downstream 5000 false Chr19: 12256763-12261762 Glycine max
Glyma.19G061000 10.0kb upstream 10.0kb upstream 12431 true Chr19: 12244332-12256762 Glycine max
Glyma.19G061000 10.0kb upstream 10.0kb upstream 10000 false Chr19: 12244332-12254331 Glycine max
Glyma.19G061000 10.0kb downstream 10.0kb downstream 12431 true Chr19: 12254332-12266762 Glycine max
Glyma.19G061000 10.0kb downstream 10.0kb downstream 10000 false Chr19: 12256763-12266762 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122247737 5265 Fabidae Singleton cluster - no MSA
123991446 5270 Rosid Singleton cluster - no MSA
123566396 5271 Pentapetalae Singleton cluster - no MSA
122601155 5272 Eudicot Singleton cluster - no MSA
122051170 5273 Angiosperm View MSA
121345587 5274 Embryophyte View MSA
123424058 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.012     Low  
cufflinks 0.008     Low Low
cufflinks 0.013     Low  
cufflinks 0.039     Low High
cufflinks 0.017     Low  
cufflinks 0.015     Low  
cufflinks 0.007     Low Low
cufflinks 0.018     Low  
cufflinks 0.018     Low  
cufflinks 0.033     Low High
cufflinks 0.023     Low  
cufflinks 0.007     Low Low
cufflinks 0.034     Low High
cufflinks 0.037     Low High
cufflinks 0.016     Low  
cufflinks 0.024     Low  
cufflinks 0.02     Low  

0 Strain