Gene : Glyma.03G081500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31307:SF17 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K7P8 Genomic Order:  815
Name:  ? Glyma.03G081500 Secondary Identifier:  ? PAC:30517506
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G081500 0.5kb upstream 0.5kb upstream 4671 true Chr03: 21975222-21979892 Glycine max
Glyma.03G081500 0.5kb upstream 0.5kb upstream 500 false Chr03: 21979393-21979892 Glycine max
Glyma.03G081500 0.5kb downstream 0.5kb downstream 4671 true Chr03: 21974722-21979392 Glycine max
Glyma.03G081500 0.5kb downstream 0.5kb downstream 500 false Chr03: 21974722-21975221 Glycine max
Glyma.03G081500 1.0kb upstream 1.0kb upstream 5171 true Chr03: 21975222-21980392 Glycine max
Glyma.03G081500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 21979393-21980392 Glycine max
Glyma.03G081500 1.0kb downstream 1.0kb downstream 5171 true Chr03: 21974222-21979392 Glycine max
Glyma.03G081500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 21974222-21975221 Glycine max
Glyma.03G081500 2.0kb upstream 2.0kb upstream 6171 true Chr03: 21975222-21981392 Glycine max
Glyma.03G081500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 21979393-21981392 Glycine max
Glyma.03G081500 2.0kb downstream 2.0kb downstream 6171 true Chr03: 21973222-21979392 Glycine max
Glyma.03G081500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 21973222-21975221 Glycine max
Glyma.03G081500 5.0kb upstream 5.0kb upstream 9171 true Chr03: 21975222-21984392 Glycine max
Glyma.03G081500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 21979393-21984392 Glycine max
Glyma.03G081500 5.0kb downstream 5.0kb downstream 9171 true Chr03: 21970222-21979392 Glycine max
Glyma.03G081500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 21970222-21975221 Glycine max
Glyma.03G081500 10.0kb upstream 10.0kb upstream 14171 true Chr03: 21975222-21989392 Glycine max
Glyma.03G081500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 21979393-21989392 Glycine max
Glyma.03G081500 10.0kb downstream 10.0kb downstream 14171 true Chr03: 21965222-21979392 Glycine max
Glyma.03G081500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 21965222-21975221 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302150 5265 Fabidae View MSA
124068067 5270 Rosid View MSA
123747324 5271 Pentapetalae View MSA
122790376 5272 Eudicot View MSA
122048588 5273 Angiosperm View MSA
121351505 5274 Embryophyte View MSA
123382195 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.35331 0.0 27.9806   High
cufflinks 3.37104 0.0 16.2176    
cufflinks 2.781 0.0 14.9245   Low
cufflinks 3.93867 0.0 20.4949    
cufflinks 5.84003 0.0 25.8945   High
cufflinks 4.03612 0.0 22.7937    
cufflinks 4.49425 0.0 21.8365    
cufflinks 5.90761 0.0 24.1339   High
cufflinks 4.25799 0.0 18.5273    
cufflinks 0.611        
cufflinks 0.289       Low
cufflinks 0.372        
cufflinks 0.548        
cufflinks 0.553        
cufflinks 0.71       High
cufflinks 0.565        
cufflinks 0.315       Low
cufflinks 0.468        
cufflinks 0.427        
cufflinks 0.759       High
cufflinks 0.301       Low
cufflinks 0.654       High
cufflinks 0.499        
cufflinks 0.267       Low
cufflinks 0.591        
cufflinks 0.35        

0 Strain