Gene : Glyma.03G063600 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR22950:SF256 - AUXIN TRANSPORTER PROTEIN 1-RELATED Genomic Order:  636
Name:  ? Glyma.03G063600 Secondary Identifier:  ? PAC:30516561
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G063600 0.5kb upstream 0.5kb upstream 9224 true Chr03: 10128451-10137674 Glycine max
Glyma.03G063600 0.5kb upstream 0.5kb upstream 500 false Chr03: 10128451-10128950 Glycine max
Glyma.03G063600 0.5kb downstream 0.5kb downstream 9224 true Chr03: 10128951-10138174 Glycine max
Glyma.03G063600 0.5kb downstream 0.5kb downstream 500 false Chr03: 10137675-10138174 Glycine max
Glyma.03G063600 1.0kb upstream 1.0kb upstream 9724 true Chr03: 10127951-10137674 Glycine max
Glyma.03G063600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 10127951-10128950 Glycine max
Glyma.03G063600 1.0kb downstream 1.0kb downstream 9724 true Chr03: 10128951-10138674 Glycine max
Glyma.03G063600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 10137675-10138674 Glycine max
Glyma.03G063600 2.0kb upstream 2.0kb upstream 10724 true Chr03: 10126951-10137674 Glycine max
Glyma.03G063600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 10126951-10128950 Glycine max
Glyma.03G063600 2.0kb downstream 2.0kb downstream 10724 true Chr03: 10128951-10139674 Glycine max
Glyma.03G063600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 10137675-10139674 Glycine max
Glyma.03G063600 5.0kb upstream 5.0kb upstream 13724 true Chr03: 10123951-10137674 Glycine max
Glyma.03G063600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 10123951-10128950 Glycine max
Glyma.03G063600 5.0kb downstream 5.0kb downstream 13724 true Chr03: 10128951-10142674 Glycine max
Glyma.03G063600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 10137675-10142674 Glycine max
Glyma.03G063600 10.0kb upstream 10.0kb upstream 18724 true Chr03: 10118951-10137674 Glycine max
Glyma.03G063600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 10118951-10128950 Glycine max
Glyma.03G063600 10.0kb downstream 10.0kb downstream 18724 true Chr03: 10128951-10147674 Glycine max
Glyma.03G063600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 10137675-10147674 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310331 5265 Fabidae View MSA
124074044 5270 Rosid View MSA
123753033 5271 Pentapetalae View MSA
122796609 5272 Eudicot View MSA
122045744 5273 Angiosperm View MSA
121347395 5274 Embryophyte View MSA
123427582 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 42.821 0.0 123.45 High High
cufflinks 12.9434 0.0 34.5314    
cufflinks 5.6354 0.0 15.5454    
cufflinks 22.2012 0.0 60.1827 High  
cufflinks 39.8684 0.0 113.882 High  
cufflinks 19.5434 0.0 52.6226    
cufflinks 1.62701 0.0 5.26652   Low
cufflinks 25.0329 0.0 68.4251 High  
cufflinks 14.2068 0.0 37.9208    
cufflinks 8.989     High  
cufflinks 1.995        
cufflinks 2.832        
cufflinks 10.715     High  
cufflinks 14.578     High  
cufflinks 0.31       Low
cufflinks 14.329     High  
cufflinks 2.387        
cufflinks 9.493     High  
cufflinks 3.02        
cufflinks 18.955     High High
cufflinks 3.947        
cufflinks 13.077     High  
cufflinks 3.647        
cufflinks 2.57        
cufflinks 17.482     High High
cufflinks 2.255        

0 Strain