Gene : Glyma.03G080600 G. max Wm82.a2.v1
Defline:  (1 of 40) PF00651//PF03000 - BTB/POZ domain (BTB) // NPH3 family (NPH3) Genomic Order:  806
Name:  ? Glyma.03G080600 Secondary Identifier:  ? PAC:30516895
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G080600 0.5kb upstream 0.5kb upstream 4794 true Chr03: 21507600-21512393 Glycine max
Glyma.03G080600 0.5kb upstream 0.5kb upstream 500 false Chr03: 21507600-21508099 Glycine max
Glyma.03G080600 0.5kb downstream 0.5kb downstream 4794 true Chr03: 21508100-21512893 Glycine max
Glyma.03G080600 0.5kb downstream 0.5kb downstream 500 false Chr03: 21512394-21512893 Glycine max
Glyma.03G080600 1.0kb upstream 1.0kb upstream 5294 true Chr03: 21507100-21512393 Glycine max
Glyma.03G080600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 21507100-21508099 Glycine max
Glyma.03G080600 1.0kb downstream 1.0kb downstream 5294 true Chr03: 21508100-21513393 Glycine max
Glyma.03G080600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 21512394-21513393 Glycine max
Glyma.03G080600 2.0kb upstream 2.0kb upstream 6294 true Chr03: 21506100-21512393 Glycine max
Glyma.03G080600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 21506100-21508099 Glycine max
Glyma.03G080600 2.0kb downstream 2.0kb downstream 6294 true Chr03: 21508100-21514393 Glycine max
Glyma.03G080600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 21512394-21514393 Glycine max
Glyma.03G080600 5.0kb upstream 5.0kb upstream 9294 true Chr03: 21503100-21512393 Glycine max
Glyma.03G080600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 21503100-21508099 Glycine max
Glyma.03G080600 5.0kb downstream 5.0kb downstream 9294 true Chr03: 21508100-21517393 Glycine max
Glyma.03G080600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 21512394-21517393 Glycine max
Glyma.03G080600 10.0kb upstream 10.0kb upstream 14294 true Chr03: 21498100-21512393 Glycine max
Glyma.03G080600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 21498100-21508099 Glycine max
Glyma.03G080600 10.0kb downstream 10.0kb downstream 14294 true Chr03: 21508100-21522393 Glycine max
Glyma.03G080600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 21512394-21522393 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301310 5265 Fabidae View MSA
124065834 5270 Rosid View MSA
123743822 5271 Pentapetalae View MSA
122789563 5272 Eudicot View MSA
122044004 5273 Angiosperm View MSA
121350656 5274 Embryophyte View MSA
123381839 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.51871 0.0 21.9462    
cufflinks 6.162 0.0 29.5272    
cufflinks 1.86808 0.0 12.1372    
cufflinks 5.03031 0.0 23.9264    
cufflinks 3.49328 0.0 16.7971    
cufflinks 1.47104 0.0 8.61602    
cufflinks 0.651155 0.0 4.47197   Low
cufflinks 15.0915 0.0 61.0643   High
cufflinks 11.3908 0.0 50.4788   High
cufflinks 0.395       High
cufflinks 0.056       Low
cufflinks 0.316       High
cufflinks 0.28        
cufflinks 0.185        
cufflinks 0.11        
cufflinks 0.176        
cufflinks 0.101        
cufflinks 0.107     Low  
cufflinks 0.661       High
cufflinks 0.149        
cufflinks 0.103        
cufflinks 0.144        
cufflinks 0.17        
cufflinks 0.088        
cufflinks 0.131        
cufflinks 0.09        

0 Strain