Gene : Glyma.02G280700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13247 - TETRATRICOPEPTIDE REPEAT PROTEIN 11 TPR REPEAT PROTEIN 11 Genomic Order:  2807
Name:  ? Glyma.02G280700 Secondary Identifier:  ? PAC:30509976
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G280700 0.5kb upstream 0.5kb upstream 2669 true Chr02: 46309996-46312664 Glycine max
Glyma.02G280700 0.5kb upstream 0.5kb upstream 500 false Chr02: 46312165-46312664 Glycine max
Glyma.02G280700 0.5kb downstream 0.5kb downstream 2669 true Chr02: 46309496-46312164 Glycine max
Glyma.02G280700 0.5kb downstream 0.5kb downstream 500 false Chr02: 46309496-46309995 Glycine max
Glyma.02G280700 1.0kb upstream 1.0kb upstream 3169 true Chr02: 46309996-46313164 Glycine max
Glyma.02G280700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 46312165-46313164 Glycine max
Glyma.02G280700 1.0kb downstream 1.0kb downstream 3169 true Chr02: 46308996-46312164 Glycine max
Glyma.02G280700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 46308996-46309995 Glycine max
Glyma.02G280700 2.0kb upstream 2.0kb upstream 4169 true Chr02: 46309996-46314164 Glycine max
Glyma.02G280700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 46312165-46314164 Glycine max
Glyma.02G280700 2.0kb downstream 2.0kb downstream 4169 true Chr02: 46307996-46312164 Glycine max
Glyma.02G280700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 46307996-46309995 Glycine max
Glyma.02G280700 5.0kb upstream 5.0kb upstream 7169 true Chr02: 46309996-46317164 Glycine max
Glyma.02G280700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 46312165-46317164 Glycine max
Glyma.02G280700 5.0kb downstream 5.0kb downstream 7169 true Chr02: 46304996-46312164 Glycine max
Glyma.02G280700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 46304996-46309995 Glycine max
Glyma.02G280700 10.0kb upstream 10.0kb upstream 12169 true Chr02: 46309996-46322164 Glycine max
Glyma.02G280700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 46312165-46322164 Glycine max
Glyma.02G280700 10.0kb downstream 10.0kb downstream 12169 true Chr02: 46299996-46312164 Glycine max
Glyma.02G280700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 46299996-46309995 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297684 5265 Fabidae View MSA
124071938 5270 Rosid View MSA
123743204 5271 Pentapetalae View MSA
122793095 5272 Eudicot View MSA
122046203 5273 Angiosperm View MSA
123429111 5275 Viridiplantae View MSA
121347777 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 57.2561 0.0 188.481 High  
cufflinks 29.1804 0.0 92.6065 High Low
cufflinks 59.7551 0.0 197.059 High High
cufflinks 44.0978 0.0 140.698 High  
cufflinks 27.5984 0.0 88.0065 High Low
cufflinks 44.4873 0.0 141.862 High  
cufflinks 62.718 0.0 207.692 High High
cufflinks 47.83 0.0 153.507 High  
cufflinks 32.26 0.0 102.179 High  
cufflinks 6.423        
cufflinks 9.953     High High
cufflinks 9.618     High High
cufflinks 5.818        
cufflinks 5.031       Low
cufflinks 7.798     High  
cufflinks 6.144        
cufflinks 6.019        
cufflinks 6.381        
cufflinks 5.992        
cufflinks 7.466     High  
cufflinks 9.564     High High
cufflinks 8.083     High  
cufflinks 5.823        
cufflinks 10.047     High High
cufflinks 6.479        
cufflinks 7.202     High  

0 Strain