Gene : Glyma.02G278400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10015//PTHR10015:SF177 - HEAT SHOCK TRANSCRIPTION FACTOR Genomic Order:  2784
Name:  ? Glyma.02G278400 Secondary Identifier:  ? PAC:30507444
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G278400 0.5kb upstream 0.5kb upstream 2047 true Chr02: 46094573-46096619 Glycine max
Glyma.02G278400 0.5kb upstream 0.5kb upstream 500 false Chr02: 46096120-46096619 Glycine max
Glyma.02G278400 0.5kb downstream 0.5kb downstream 2047 true Chr02: 46094073-46096119 Glycine max
Glyma.02G278400 0.5kb downstream 0.5kb downstream 500 false Chr02: 46094073-46094572 Glycine max
Glyma.02G278400 1.0kb upstream 1.0kb upstream 2547 true Chr02: 46094573-46097119 Glycine max
Glyma.02G278400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 46096120-46097119 Glycine max
Glyma.02G278400 1.0kb downstream 1.0kb downstream 2547 true Chr02: 46093573-46096119 Glycine max
Glyma.02G278400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 46093573-46094572 Glycine max
Glyma.02G278400 2.0kb upstream 2.0kb upstream 3547 true Chr02: 46094573-46098119 Glycine max
Glyma.02G278400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 46096120-46098119 Glycine max
Glyma.02G278400 2.0kb downstream 2.0kb downstream 3547 true Chr02: 46092573-46096119 Glycine max
Glyma.02G278400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 46092573-46094572 Glycine max
Glyma.02G278400 5.0kb upstream 5.0kb upstream 6547 true Chr02: 46094573-46101119 Glycine max
Glyma.02G278400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 46096120-46101119 Glycine max
Glyma.02G278400 5.0kb downstream 5.0kb downstream 6547 true Chr02: 46089573-46096119 Glycine max
Glyma.02G278400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 46089573-46094572 Glycine max
Glyma.02G278400 10.0kb upstream 10.0kb upstream 11547 true Chr02: 46094573-46106119 Glycine max
Glyma.02G278400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 46096120-46106119 Glycine max
Glyma.02G278400 10.0kb downstream 10.0kb downstream 11547 true Chr02: 46084573-46096119 Glycine max
Glyma.02G278400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 46084573-46094572 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297656 5265 Fabidae View MSA
124070016 5270 Rosid View MSA
123749561 5271 Pentapetalae View MSA
122794562 5272 Eudicot View MSA
122050286 5273 Angiosperm View MSA
121349623 5274 Embryophyte View MSA
123428852 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0204533 0.0 0.0925005 Low Low
cufflinks 2.51224 0.0 8.54199    
cufflinks 0.196053 0.0 0.770111 Low  
cufflinks 0.366573 0.0 1.40467    
cufflinks 8.18419 0.0 23.7916   High
cufflinks 4.91039 0.0 15.2883    
cufflinks 2.70507 0.0 9.13961    
cufflinks 1.20627 0.0 4.35196    
cufflinks 5.12582 0.0 15.8435    
cufflinks 0.664        
cufflinks 0.075       Low
cufflinks 0.491        
cufflinks 9.225     High High
cufflinks 13.122     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.236        
cufflinks 0.595        
cufflinks 0.526        
cufflinks 1.308        
cufflinks 0.66        
cufflinks 0.143       Low
cufflinks 1.459        
cufflinks 1.466        
cufflinks 0.097       Low
cufflinks 1.14        
cufflinks 0.405        

0 Strain