Gene : Glyma.02G277300 G. max Wm82.a2.v1
Defline:  (1 of 105) PF03168 - Late embryogenesis abundant protein (LEA_2) Genomic Order:  2773
Name:  ? Glyma.02G277300 Secondary Identifier:  ? PAC:30510741
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G277300 0.5kb upstream 0.5kb upstream 3118 true Chr02: 46010712-46013829 Glycine max
Glyma.02G277300 0.5kb upstream 0.5kb upstream 500 false Chr02: 46013330-46013829 Glycine max
Glyma.02G277300 0.5kb downstream 0.5kb downstream 3118 true Chr02: 46010212-46013329 Glycine max
Glyma.02G277300 0.5kb downstream 0.5kb downstream 500 false Chr02: 46010212-46010711 Glycine max
Glyma.02G277300 1.0kb upstream 1.0kb upstream 3618 true Chr02: 46010712-46014329 Glycine max
Glyma.02G277300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 46013330-46014329 Glycine max
Glyma.02G277300 1.0kb downstream 1.0kb downstream 3618 true Chr02: 46009712-46013329 Glycine max
Glyma.02G277300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 46009712-46010711 Glycine max
Glyma.02G277300 2.0kb upstream 2.0kb upstream 4618 true Chr02: 46010712-46015329 Glycine max
Glyma.02G277300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 46013330-46015329 Glycine max
Glyma.02G277300 2.0kb downstream 2.0kb downstream 4618 true Chr02: 46008712-46013329 Glycine max
Glyma.02G277300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 46008712-46010711 Glycine max
Glyma.02G277300 5.0kb upstream 5.0kb upstream 7618 true Chr02: 46010712-46018329 Glycine max
Glyma.02G277300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 46013330-46018329 Glycine max
Glyma.02G277300 5.0kb downstream 5.0kb downstream 7618 true Chr02: 46005712-46013329 Glycine max
Glyma.02G277300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 46005712-46010711 Glycine max
Glyma.02G277300 10.0kb upstream 10.0kb upstream 12618 true Chr02: 46010712-46023329 Glycine max
Glyma.02G277300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 46013330-46023329 Glycine max
Glyma.02G277300 10.0kb downstream 10.0kb downstream 12618 true Chr02: 46000712-46013329 Glycine max
Glyma.02G277300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 46000712-46010711 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309281 5265 Fabidae View MSA
124066390 5270 Rosid View MSA
123747844 5271 Pentapetalae View MSA
122788467 5272 Eudicot View MSA
122045066 5273 Angiosperm View MSA
121350373 5274 Embryophyte View MSA
123381702 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.092 0.0 43.2392   Low
cufflinks 34.8719 0.0 138.065 High  
cufflinks 14.3665 0.0 49.9819    
cufflinks 38.755 0.0 155.283 High  
cufflinks 76.552 0.0 317.823 High  
cufflinks 188.378 0.0 1133.29 High High
cufflinks 7.83659 0.0 34.6207   Low
cufflinks 87.6432 0.0 384.192 High  
cufflinks 44.7287 0.0 183.055 High  
cufflinks 36.045     High High
cufflinks 3.124       Low
cufflinks 4.829        
cufflinks 26.084     High High
cufflinks 24.248     High High
cufflinks 1.716       Low
cufflinks 8.547     High  
cufflinks 13.987     High  
cufflinks 5.97        
cufflinks 8.937     High  
cufflinks 4.685        
cufflinks 6.398     High  
cufflinks 6.215        
cufflinks 9.113     High  
cufflinks 4.735        
cufflinks 4.982        
cufflinks 13.148     High  

0 Strain