Gene : Glyma.19G049400 G. max Wm82.a2.v1
Defline:  (1 of 11) PTHR26402//PTHR26402:SF593 - RESPONSE REGULATOR OF TWO-COMPONENT SYSTEM Genomic Order:  494
Name:  ? Glyma.19G049400 Secondary Identifier:  ? PAC:30511277
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G049400 0.5kb upstream 0.5kb upstream 3679 true Chr19: 7868487-7872165 Glycine max
Glyma.19G049400 0.5kb upstream 0.5kb upstream 500 false Chr19: 7871666-7872165 Glycine max
Glyma.19G049400 0.5kb downstream 0.5kb downstream 3679 true Chr19: 7867987-7871665 Glycine max
Glyma.19G049400 0.5kb downstream 0.5kb downstream 500 false Chr19: 7867987-7868486 Glycine max
Glyma.19G049400 1.0kb upstream 1.0kb upstream 4179 true Chr19: 7868487-7872665 Glycine max
Glyma.19G049400 1.0kb upstream 1.0kb upstream 1000 false Chr19: 7871666-7872665 Glycine max
Glyma.19G049400 1.0kb downstream 1.0kb downstream 4179 true Chr19: 7867487-7871665 Glycine max
Glyma.19G049400 1.0kb downstream 1.0kb downstream 1000 false Chr19: 7867487-7868486 Glycine max
Glyma.19G049400 2.0kb upstream 2.0kb upstream 5179 true Chr19: 7868487-7873665 Glycine max
Glyma.19G049400 2.0kb upstream 2.0kb upstream 2000 false Chr19: 7871666-7873665 Glycine max
Glyma.19G049400 2.0kb downstream 2.0kb downstream 5179 true Chr19: 7866487-7871665 Glycine max
Glyma.19G049400 2.0kb downstream 2.0kb downstream 2000 false Chr19: 7866487-7868486 Glycine max
Glyma.19G049400 5.0kb upstream 5.0kb upstream 8179 true Chr19: 7868487-7876665 Glycine max
Glyma.19G049400 5.0kb upstream 5.0kb upstream 5000 false Chr19: 7871666-7876665 Glycine max
Glyma.19G049400 5.0kb downstream 5.0kb downstream 8179 true Chr19: 7863487-7871665 Glycine max
Glyma.19G049400 5.0kb downstream 5.0kb downstream 5000 false Chr19: 7863487-7868486 Glycine max
Glyma.19G049400 10.0kb upstream 10.0kb upstream 13179 true Chr19: 7868487-7881665 Glycine max
Glyma.19G049400 10.0kb upstream 10.0kb upstream 10000 false Chr19: 7871666-7881665 Glycine max
Glyma.19G049400 10.0kb downstream 10.0kb downstream 13179 true Chr19: 7858487-7871665 Glycine max
Glyma.19G049400 10.0kb downstream 10.0kb downstream 10000 false Chr19: 7858487-7868486 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313890 5265 Fabidae View MSA
124074544 5270 Rosid View MSA
123752744 5271 Pentapetalae View MSA
122797364 5272 Eudicot View MSA
122048998 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121350891 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.229751 0.0 1.11351   Low
cufflinks 1.14978 0.0 7.01243   High
cufflinks 0.580757 0.0 3.80773    
cufflinks 0.766945 0.0 3.40232    
cufflinks 0.484294 0.0 2.41103    
cufflinks 0.758316 0.0 3.43327    
cufflinks 0.523157 0.0 3.60182    
cufflinks 1.06788 0.0 6.65559   High
cufflinks 0.674581 0.0 4.53435    
cufflinks 0.279        
cufflinks 0.289        
cufflinks 0.542        
cufflinks 0.107       Low
cufflinks 0.117       Low
cufflinks 0.257        
cufflinks 0.604        
cufflinks 0.057     Low Low
cufflinks 0.808       High
cufflinks 0.282        
cufflinks 0.805       High
cufflinks 0.192        
cufflinks 0.571        
cufflinks 0.338        
cufflinks 0.254        
cufflinks 0.734       High
cufflinks 0.238        

0 Strain