Gene : Glyma.02G283400 G. max Wm82.a2.v1
Defline:  (1 of 4) 2.5.1.18//2.5.1.32 - Glutathione transferase / S-(hydroxyalkyl)glutathione lyase // 15-cis-phytoene synthase / PSase Genomic Order:  2834
Name:  ? Glyma.02G283400 Secondary Identifier:  ? PAC:30509003
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax CAROTENOID-PWY Glycine max pathologic  
Gmax PWY-6475 Glycine max pathologic  
Gmax PWY-6842 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G283400 0.5kb upstream 0.5kb upstream 3509 true Chr02: 46520816-46524324 Glycine max
Glyma.02G283400 0.5kb upstream 0.5kb upstream 500 false Chr02: 46523825-46524324 Glycine max
Glyma.02G283400 0.5kb downstream 0.5kb downstream 3509 true Chr02: 46520316-46523824 Glycine max
Glyma.02G283400 0.5kb downstream 0.5kb downstream 500 false Chr02: 46520316-46520815 Glycine max
Glyma.02G283400 1.0kb upstream 1.0kb upstream 4009 true Chr02: 46520816-46524824 Glycine max
Glyma.02G283400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 46523825-46524824 Glycine max
Glyma.02G283400 1.0kb downstream 1.0kb downstream 4009 true Chr02: 46519816-46523824 Glycine max
Glyma.02G283400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 46519816-46520815 Glycine max
Glyma.02G283400 2.0kb upstream 2.0kb upstream 5009 true Chr02: 46520816-46525824 Glycine max
Glyma.02G283400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 46523825-46525824 Glycine max
Glyma.02G283400 2.0kb downstream 2.0kb downstream 5009 true Chr02: 46518816-46523824 Glycine max
Glyma.02G283400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 46518816-46520815 Glycine max
Glyma.02G283400 5.0kb upstream 5.0kb upstream 8009 true Chr02: 46520816-46528824 Glycine max
Glyma.02G283400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 46523825-46528824 Glycine max
Glyma.02G283400 5.0kb downstream 5.0kb downstream 8009 true Chr02: 46515816-46523824 Glycine max
Glyma.02G283400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 46515816-46520815 Glycine max
Glyma.02G283400 10.0kb upstream 10.0kb upstream 13009 true Chr02: 46520816-46533824 Glycine max
Glyma.02G283400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 46523825-46533824 Glycine max
Glyma.02G283400 10.0kb downstream 10.0kb downstream 13009 true Chr02: 46510816-46523824 Glycine max
Glyma.02G283400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 46510816-46520815 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041269 5273 Angiosperm View MSA
122312069 5265 Fabidae View MSA
124069921 5270 Rosid View MSA
123743557 5271 Pentapetalae View MSA
122795955 5272 Eudicot View MSA
121345575 5274 Embryophyte View MSA
123426823 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 61.8753 0.0 179.367 High High
cufflinks 4.28413 0.0 12.6852    
cufflinks 2.16728 0.0 7.02157    
cufflinks 1.27388 0.0 4.41127    
cufflinks 1.58597 0.0 5.38045    
cufflinks 0.784358 0.0 2.82436    
cufflinks 5.14643 0.0 14.8922    
cufflinks 0.354867 0.0 1.33332    
cufflinks 0.0869237 0.0 0.346008 Low Low
cufflinks 2.636        
cufflinks 0.007     Low Low
cufflinks 2.531        
cufflinks 2.16        
cufflinks 1.62        
cufflinks 0.019     Low Low
cufflinks 26.861     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.336        
cufflinks 5.993        
cufflinks 15.76     High  
cufflinks 0.066       Low
cufflinks 24.558     High High
cufflinks 19.557     High  
cufflinks 0.025     Low Low
cufflinks 27.409     High High
cufflinks 0.201        

0 Strain