Gene : Glyma.02G282000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10742:SF238 - POLYAMINE OXIDASE 3-RELATED Genomic Order:  2820
Name:  ? Glyma.02G282000 Secondary Identifier:  ? PAC:30509487
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6441 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G282000 0.5kb upstream 0.5kb upstream 4803 true Chr02: 46427031-46431833 Glycine max
Glyma.02G282000 0.5kb upstream 0.5kb upstream 500 false Chr02: 46431334-46431833 Glycine max
Glyma.02G282000 0.5kb downstream 0.5kb downstream 4803 true Chr02: 46426531-46431333 Glycine max
Glyma.02G282000 0.5kb downstream 0.5kb downstream 500 false Chr02: 46426531-46427030 Glycine max
Glyma.02G282000 1.0kb upstream 1.0kb upstream 5303 true Chr02: 46427031-46432333 Glycine max
Glyma.02G282000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 46431334-46432333 Glycine max
Glyma.02G282000 1.0kb downstream 1.0kb downstream 5303 true Chr02: 46426031-46431333 Glycine max
Glyma.02G282000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 46426031-46427030 Glycine max
Glyma.02G282000 2.0kb upstream 2.0kb upstream 6303 true Chr02: 46427031-46433333 Glycine max
Glyma.02G282000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 46431334-46433333 Glycine max
Glyma.02G282000 2.0kb downstream 2.0kb downstream 6303 true Chr02: 46425031-46431333 Glycine max
Glyma.02G282000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 46425031-46427030 Glycine max
Glyma.02G282000 5.0kb upstream 5.0kb upstream 9303 true Chr02: 46427031-46436333 Glycine max
Glyma.02G282000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 46431334-46436333 Glycine max
Glyma.02G282000 5.0kb downstream 5.0kb downstream 9303 true Chr02: 46422031-46431333 Glycine max
Glyma.02G282000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 46422031-46427030 Glycine max
Glyma.02G282000 10.0kb upstream 10.0kb upstream 14303 true Chr02: 46427031-46441333 Glycine max
Glyma.02G282000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 46431334-46441333 Glycine max
Glyma.02G282000 10.0kb downstream 10.0kb downstream 14303 true Chr02: 46417031-46431333 Glycine max
Glyma.02G282000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 46417031-46427030 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310798 5265 Fabidae View MSA
124065173 5270 Rosid View MSA
123745734 5271 Pentapetalae View MSA
122788869 5272 Eudicot View MSA
122044597 5273 Angiosperm View MSA
121345919 5274 Embryophyte View MSA
123428250 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.7845 0.0 42.1295    
cufflinks 14.4694 0.0 38.6025    
cufflinks 39.7004 0.0 112.404 High High
cufflinks 12.9652 0.0 34.6086    
cufflinks 16.0321 0.0 42.7949    
cufflinks 32.2095 0.0 89.0549 High High
cufflinks 11.8748 0.0 31.7462    
cufflinks 19.1126 0.0 51.1821    
cufflinks 13.1123 0.0 34.9966    
cufflinks 11.842     High  
cufflinks 5.416        
cufflinks 19.952     High High
cufflinks 10.904     High  
cufflinks 8.421     High  
cufflinks 3.398       Low
cufflinks 11.31     High  
cufflinks 5.386        
cufflinks 8.371     High  
cufflinks 9.926     High  
cufflinks 12.06     High  
cufflinks 3.93       Low
cufflinks 12.596     High  
cufflinks 11.597     High  
cufflinks 6.397     High  
cufflinks 12.277     High  
cufflinks 6.252        

0 Strain