Gene : Glyma.02G286600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10536 - DNA PRIMASE SMALL SUBUNIT Genomic Order:  2866
Name:  ? Glyma.02G286600 Secondary Identifier:  ? PAC:30507011
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G286600 0.5kb upstream 0.5kb upstream 5456 true Chr02: 46726883-46732338 Glycine max
Glyma.02G286600 0.5kb upstream 0.5kb upstream 500 false Chr02: 46726883-46727382 Glycine max
Glyma.02G286600 0.5kb downstream 0.5kb downstream 5456 true Chr02: 46727383-46732838 Glycine max
Glyma.02G286600 0.5kb downstream 0.5kb downstream 500 false Chr02: 46732339-46732838 Glycine max
Glyma.02G286600 1.0kb upstream 1.0kb upstream 5956 true Chr02: 46726383-46732338 Glycine max
Glyma.02G286600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 46726383-46727382 Glycine max
Glyma.02G286600 1.0kb downstream 1.0kb downstream 5956 true Chr02: 46727383-46733338 Glycine max
Glyma.02G286600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 46732339-46733338 Glycine max
Glyma.02G286600 2.0kb upstream 2.0kb upstream 6956 true Chr02: 46725383-46732338 Glycine max
Glyma.02G286600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 46725383-46727382 Glycine max
Glyma.02G286600 2.0kb downstream 2.0kb downstream 6956 true Chr02: 46727383-46734338 Glycine max
Glyma.02G286600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 46732339-46734338 Glycine max
Glyma.02G286600 5.0kb upstream 5.0kb upstream 9956 true Chr02: 46722383-46732338 Glycine max
Glyma.02G286600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 46722383-46727382 Glycine max
Glyma.02G286600 5.0kb downstream 5.0kb downstream 9956 true Chr02: 46727383-46737338 Glycine max
Glyma.02G286600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 46732339-46737338 Glycine max
Glyma.02G286600 10.0kb upstream 10.0kb upstream 14956 true Chr02: 46717383-46732338 Glycine max
Glyma.02G286600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 46717383-46727382 Glycine max
Glyma.02G286600 10.0kb downstream 10.0kb downstream 14956 true Chr02: 46727383-46742338 Glycine max
Glyma.02G286600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 46732339-46742338 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302363 5265 Fabidae View MSA
124063611 5270 Rosid View MSA
123741537 5271 Pentapetalae View MSA
122792233 5272 Eudicot View MSA
122044142 5273 Angiosperm View MSA
121345966 5274 Embryophyte View MSA
123424761 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.505001 0.0 2.51887   Low
cufflinks 14.6153 0.0 44.1137   High
cufflinks 1.44859 0.0 5.85329    
cufflinks 3.0705 0.0 10.2047    
cufflinks 5.51304 0.0 19.961    
cufflinks 4.97444 0.0 18.5544    
cufflinks 2.95895 0.0 10.0132    
cufflinks 4.73628 0.0 17.8644    
cufflinks 6.56903 0.0 22.4895    
cufflinks 1.264        
cufflinks 0.136       Low
cufflinks 1.431        
cufflinks 2.731        
cufflinks 3.359       High
cufflinks 0.1       Low
cufflinks 1.384        
cufflinks 0.389        
cufflinks 0.967        
cufflinks 5.115       High
cufflinks 1.062        
cufflinks 0.255        
cufflinks 1.325        
cufflinks 3.852       High
cufflinks 0.107       Low
cufflinks 1.358        
cufflinks 0.447        

0 Strain