Gene : Glyma.02G288900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10701 - SMALL NUCLEAR RIBONUCLEOPROTEIN-ASSOCIATED PROTEIN B AND N Genomic Order:  2889
Name:  ? Glyma.02G288900 Secondary Identifier:  ? PAC:30507342
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G288900 0.5kb upstream 0.5kb upstream 4308 true Chr02: 46890831-46895138 Glycine max
Glyma.02G288900 0.5kb upstream 0.5kb upstream 500 false Chr02: 46894639-46895138 Glycine max
Glyma.02G288900 0.5kb downstream 0.5kb downstream 4308 true Chr02: 46890331-46894638 Glycine max
Glyma.02G288900 0.5kb downstream 0.5kb downstream 500 false Chr02: 46890331-46890830 Glycine max
Glyma.02G288900 1.0kb upstream 1.0kb upstream 4808 true Chr02: 46890831-46895638 Glycine max
Glyma.02G288900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 46894639-46895638 Glycine max
Glyma.02G288900 1.0kb downstream 1.0kb downstream 4808 true Chr02: 46889831-46894638 Glycine max
Glyma.02G288900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 46889831-46890830 Glycine max
Glyma.02G288900 2.0kb upstream 2.0kb upstream 5808 true Chr02: 46890831-46896638 Glycine max
Glyma.02G288900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 46894639-46896638 Glycine max
Glyma.02G288900 2.0kb downstream 2.0kb downstream 5808 true Chr02: 46888831-46894638 Glycine max
Glyma.02G288900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 46888831-46890830 Glycine max
Glyma.02G288900 5.0kb upstream 5.0kb upstream 8808 true Chr02: 46890831-46899638 Glycine max
Glyma.02G288900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 46894639-46899638 Glycine max
Glyma.02G288900 5.0kb downstream 5.0kb downstream 8808 true Chr02: 46885831-46894638 Glycine max
Glyma.02G288900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 46885831-46890830 Glycine max
Glyma.02G288900 10.0kb upstream 10.0kb upstream 13808 true Chr02: 46890831-46904638 Glycine max
Glyma.02G288900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 46894639-46904638 Glycine max
Glyma.02G288900 10.0kb downstream 10.0kb downstream 13808 true Chr02: 46880831-46894638 Glycine max
Glyma.02G288900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 46880831-46890830 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307134 5265 Fabidae View MSA
124061345 5270 Rosid View MSA
123739342 5271 Pentapetalae View MSA
122791221 5272 Eudicot View MSA
122047301 5273 Angiosperm View MSA
121345396 5274 Embryophyte View MSA
123425185 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.7766 0.0 45.0331    
cufflinks 24.7749 0.0 66.0995 High  
cufflinks 8.30216 0.0 23.8116   Low
cufflinks 23.5938 0.0 62.9622 High  
cufflinks 25.1329 0.0 67.1263 High  
cufflinks 7.59368 0.0 21.5621   Low
cufflinks 26.9732 0.0 72.0684 High  
cufflinks 17.805 0.0 47.7634    
cufflinks 15.4815 0.0 41.6765    
cufflinks 4.035        
cufflinks 0.558       Low
cufflinks 3.101        
cufflinks 6.67       High
cufflinks 8.948     High High
cufflinks 0.874       Low
cufflinks 3.932        
cufflinks 1.777        
cufflinks 3.933        
cufflinks 7.213       High
cufflinks 2.383        
cufflinks 0.952       Low
cufflinks 2.659        
cufflinks 5.379        
cufflinks 0.724       Low
cufflinks 2.828        
cufflinks 1.599        

0 Strain