Gene : Glyma.02G287700 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR11945:SF150 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL1-RELATED Genomic Order:  2877
Name:  ? Glyma.02G287700 Secondary Identifier:  ? PAC:30510358
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G287700 0.5kb upstream 0.5kb upstream 7789 true Chr02: 46797935-46805723 Glycine max
Glyma.02G287700 0.5kb upstream 0.5kb upstream 500 false Chr02: 46805224-46805723 Glycine max
Glyma.02G287700 0.5kb downstream 0.5kb downstream 7789 true Chr02: 46797435-46805223 Glycine max
Glyma.02G287700 0.5kb downstream 0.5kb downstream 500 false Chr02: 46797435-46797934 Glycine max
Glyma.02G287700 1.0kb upstream 1.0kb upstream 8289 true Chr02: 46797935-46806223 Glycine max
Glyma.02G287700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 46805224-46806223 Glycine max
Glyma.02G287700 1.0kb downstream 1.0kb downstream 8289 true Chr02: 46796935-46805223 Glycine max
Glyma.02G287700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 46796935-46797934 Glycine max
Glyma.02G287700 2.0kb upstream 2.0kb upstream 9289 true Chr02: 46797935-46807223 Glycine max
Glyma.02G287700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 46805224-46807223 Glycine max
Glyma.02G287700 2.0kb downstream 2.0kb downstream 9289 true Chr02: 46795935-46805223 Glycine max
Glyma.02G287700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 46795935-46797934 Glycine max
Glyma.02G287700 5.0kb upstream 5.0kb upstream 12289 true Chr02: 46797935-46810223 Glycine max
Glyma.02G287700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 46805224-46810223 Glycine max
Glyma.02G287700 5.0kb downstream 5.0kb downstream 12289 true Chr02: 46792935-46805223 Glycine max
Glyma.02G287700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 46792935-46797934 Glycine max
Glyma.02G287700 10.0kb upstream 10.0kb upstream 17289 true Chr02: 46797935-46815223 Glycine max
Glyma.02G287700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 46805224-46815223 Glycine max
Glyma.02G287700 10.0kb downstream 10.0kb downstream 17289 true Chr02: 46787935-46805223 Glycine max
Glyma.02G287700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 46787935-46797934 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307292 5265 Fabidae View MSA
124063483 5270 Rosid View MSA
123747867 5271 Pentapetalae View MSA
122793842 5272 Eudicot View MSA
122049629 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.51658 0.0 20.0039    
cufflinks 72.1515 0.0 390.017 High High
cufflinks 0.106002 0.0 0.427157 Low  
cufflinks 0.0665908 0.0 0.276023 Low  
cufflinks 9.85994 0.0 37.833    
cufflinks 0.035096 0.0 0.159067 Low  
cufflinks 0.0709987 0.0 0.291973 Low  
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.204       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.001     Low Low
cufflinks 0.006     Low  
cufflinks 0.102     Low High
cufflinks 0.002     Low  
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low  
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain