Gene : Glyma.02G293200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13161:SF15 - SPLICING FACTOR, SUPPRESSOR OF WHITE-APRICOT HOMOLOG Genomic Order:  2932
Name:  ? Glyma.02G293200 Secondary Identifier:  ? PAC:30508238
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G293200 0.5kb upstream 0.5kb upstream 5458 true Chr02: 47192854-47198311 Glycine max
Glyma.02G293200 0.5kb upstream 0.5kb upstream 500 false Chr02: 47192854-47193353 Glycine max
Glyma.02G293200 0.5kb downstream 0.5kb downstream 5458 true Chr02: 47193354-47198811 Glycine max
Glyma.02G293200 0.5kb downstream 0.5kb downstream 500 false Chr02: 47198312-47198811 Glycine max
Glyma.02G293200 1.0kb upstream 1.0kb upstream 5958 true Chr02: 47192354-47198311 Glycine max
Glyma.02G293200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 47192354-47193353 Glycine max
Glyma.02G293200 1.0kb downstream 1.0kb downstream 5958 true Chr02: 47193354-47199311 Glycine max
Glyma.02G293200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 47198312-47199311 Glycine max
Glyma.02G293200 2.0kb upstream 2.0kb upstream 6958 true Chr02: 47191354-47198311 Glycine max
Glyma.02G293200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 47191354-47193353 Glycine max
Glyma.02G293200 2.0kb downstream 2.0kb downstream 6958 true Chr02: 47193354-47200311 Glycine max
Glyma.02G293200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 47198312-47200311 Glycine max
Glyma.02G293200 5.0kb upstream 5.0kb upstream 9958 true Chr02: 47188354-47198311 Glycine max
Glyma.02G293200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 47188354-47193353 Glycine max
Glyma.02G293200 5.0kb downstream 5.0kb downstream 9958 true Chr02: 47193354-47203311 Glycine max
Glyma.02G293200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 47198312-47203311 Glycine max
Glyma.02G293200 10.0kb upstream 10.0kb upstream 14958 true Chr02: 47183354-47198311 Glycine max
Glyma.02G293200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 47183354-47193353 Glycine max
Glyma.02G293200 10.0kb downstream 10.0kb downstream 14958 true Chr02: 47193354-47208311 Glycine max
Glyma.02G293200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 47198312-47208311 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301281 5265 Fabidae View MSA
124061656 5270 Rosid View MSA
123739553 5271 Pentapetalae View MSA
122786719 5272 Eudicot View MSA
122047269 5273 Angiosperm View MSA
121346559 5274 Embryophyte View MSA
123424366 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.72784 0.0 35.2104   High
cufflinks 6.31576 0.0 22.7271    
cufflinks 9.3547 0.0 33.8352   High
cufflinks 4.71736 0.0 17.1961   Low
cufflinks 7.02399 0.0 26.2227    
cufflinks 5.27829 0.0 19.6478    
cufflinks 6.97386 0.0 25.5828    
cufflinks 5.07558 0.0 18.4083    
cufflinks 6.0006 0.0 21.6529    
cufflinks 1.11       Low
cufflinks 2.101        
cufflinks 2.505       High
cufflinks 1.615        
cufflinks 2.261        
cufflinks 2.347        
cufflinks 2.017        
cufflinks 1.291       Low
cufflinks 2.13        
cufflinks 2.046        
cufflinks 2.052        
cufflinks 1.841        
cufflinks 2.122        
cufflinks 2.062        
cufflinks 1.876        
cufflinks 2.219        
cufflinks 1.859        

0 Strain