Gene : Glyma.02G299600 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR10848//PTHR10848:SF3 - MEIOTIC RECOMBINATION PROTEIN SPO11 Genomic Order:  2996
Name:  ? Glyma.02G299600 Secondary Identifier:  ? PAC:30510337
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G299600 0.5kb upstream 0.5kb upstream 4728 true Chr02: 47646816-47651543 Glycine max
Glyma.02G299600 0.5kb upstream 0.5kb upstream 500 false Chr02: 47651044-47651543 Glycine max
Glyma.02G299600 0.5kb downstream 0.5kb downstream 4728 true Chr02: 47646316-47651043 Glycine max
Glyma.02G299600 0.5kb downstream 0.5kb downstream 500 false Chr02: 47646316-47646815 Glycine max
Glyma.02G299600 1.0kb upstream 1.0kb upstream 5228 true Chr02: 47646816-47652043 Glycine max
Glyma.02G299600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 47651044-47652043 Glycine max
Glyma.02G299600 1.0kb downstream 1.0kb downstream 5228 true Chr02: 47645816-47651043 Glycine max
Glyma.02G299600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 47645816-47646815 Glycine max
Glyma.02G299600 2.0kb upstream 2.0kb upstream 6228 true Chr02: 47646816-47653043 Glycine max
Glyma.02G299600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 47651044-47653043 Glycine max
Glyma.02G299600 2.0kb downstream 2.0kb downstream 6228 true Chr02: 47644816-47651043 Glycine max
Glyma.02G299600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 47644816-47646815 Glycine max
Glyma.02G299600 5.0kb upstream 5.0kb upstream 9228 true Chr02: 47646816-47656043 Glycine max
Glyma.02G299600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 47651044-47656043 Glycine max
Glyma.02G299600 5.0kb downstream 5.0kb downstream 9228 true Chr02: 47641816-47651043 Glycine max
Glyma.02G299600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 47641816-47646815 Glycine max
Glyma.02G299600 10.0kb upstream 10.0kb upstream 14228 true Chr02: 47646816-47661043 Glycine max
Glyma.02G299600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 47651044-47661043 Glycine max
Glyma.02G299600 10.0kb downstream 10.0kb downstream 14228 true Chr02: 47636816-47651043 Glycine max
Glyma.02G299600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 47636816-47646815 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306972 5265 Fabidae View MSA
124062052 5270 Rosid View MSA
123749543 5271 Pentapetalae View MSA
122787216 5272 Eudicot View MSA
122045880 5273 Angiosperm View MSA
121348033 5274 Embryophyte View MSA
123427912 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.30317 0.0 1.46375   Low
cufflinks 1.7582 0.0 9.15688   High
cufflinks 1.15966 0.0 8.76587    
cufflinks 0.58307 0.0 2.77121    
cufflinks 0.755121 0.0 3.4001    
cufflinks 0.584558 0.0 2.79635    
cufflinks 0.647416 0.0 3.97246    
cufflinks 1.42907 0.0 7.63694   High
cufflinks 0.720292 0.0 3.28036    
cufflinks 0.101        
cufflinks 0.017     Low Low
cufflinks 0.117     Low  
cufflinks 0.123        
cufflinks 0.15        
cufflinks 0.034     Low  
cufflinks 0.101     Low  
cufflinks 0.019     Low Low
cufflinks 0.057     Low  
cufflinks 0.212       High
cufflinks 0.1        
cufflinks 0.012     Low Low
cufflinks 0.114        
cufflinks 0.161       High
cufflinks 0.015     Low Low
cufflinks 0.102        
cufflinks 0.024     Low  

0 Strain