Gene : Glyma.02G248300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11134:SF1 - RUBY, ISOFORM B Genomic Order:  2483
Name:  ? Glyma.02G248300 Secondary Identifier:  ? PAC:30507216
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G248300 0.5kb upstream 0.5kb upstream 9825 true Chr02: 43564169-43573993 Glycine max
Glyma.02G248300 0.5kb upstream 0.5kb upstream 500 false Chr02: 43573494-43573993 Glycine max
Glyma.02G248300 0.5kb downstream 0.5kb downstream 9825 true Chr02: 43563669-43573493 Glycine max
Glyma.02G248300 0.5kb downstream 0.5kb downstream 500 false Chr02: 43563669-43564168 Glycine max
Glyma.02G248300 1.0kb upstream 1.0kb upstream 10325 true Chr02: 43564169-43574493 Glycine max
Glyma.02G248300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 43573494-43574493 Glycine max
Glyma.02G248300 1.0kb downstream 1.0kb downstream 10325 true Chr02: 43563169-43573493 Glycine max
Glyma.02G248300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 43563169-43564168 Glycine max
Glyma.02G248300 2.0kb upstream 2.0kb upstream 11325 true Chr02: 43564169-43575493 Glycine max
Glyma.02G248300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 43573494-43575493 Glycine max
Glyma.02G248300 2.0kb downstream 2.0kb downstream 11325 true Chr02: 43562169-43573493 Glycine max
Glyma.02G248300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 43562169-43564168 Glycine max
Glyma.02G248300 5.0kb upstream 5.0kb upstream 14325 true Chr02: 43564169-43578493 Glycine max
Glyma.02G248300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 43573494-43578493 Glycine max
Glyma.02G248300 5.0kb downstream 5.0kb downstream 14325 true Chr02: 43559169-43573493 Glycine max
Glyma.02G248300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 43559169-43564168 Glycine max
Glyma.02G248300 10.0kb upstream 10.0kb upstream 19325 true Chr02: 43564169-43583493 Glycine max
Glyma.02G248300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 43573494-43583493 Glycine max
Glyma.02G248300 10.0kb downstream 10.0kb downstream 19325 true Chr02: 43554169-43573493 Glycine max
Glyma.02G248300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 43554169-43564168 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302097 5265 Fabidae View MSA
124063953 5270 Rosid View MSA
123736647 5271 Pentapetalae View MSA
122788279 5272 Eudicot View MSA
122042560 5273 Angiosperm View MSA
121346177 5274 Embryophyte View MSA
123425286 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.38334 0.0 16.4289   High
cufflinks 5.05388 0.0 15.5662   High
cufflinks 3.90843 0.0 12.4286   Low
cufflinks 4.79339 0.0 14.7726    
cufflinks 4.27555 0.0 13.4314    
cufflinks 4.12448 0.0 13.0472    
cufflinks 3.95631 0.0 12.6688    
cufflinks 4.40985 0.0 13.796    
cufflinks 3.93354 0.0 12.5687    
cufflinks 1.347        
cufflinks 0.497       Low
cufflinks 1.266        
cufflinks 1.103        
cufflinks 1.187        
cufflinks 0.793        
cufflinks 1.905       High
cufflinks 0.559       Low
cufflinks 1.595        
cufflinks 1.774       High
cufflinks 1.528        
cufflinks 0.799        
cufflinks 1.873       High
cufflinks 1.579        
cufflinks 0.766        
cufflinks 1.565        
cufflinks 0.722       Low

0 Strain