Gene : Glyma.19G043900 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR13316 - ZINC FINGER, CCHC DOMAIN CONTAINING 8 Genomic Order:  439
Name:  ? Glyma.19G043900 Secondary Identifier:  ? PAC:30512116
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G043900 0.5kb upstream 0.5kb upstream 7446 true Chr19: 6443318-6450763 Glycine max
Glyma.19G043900 0.5kb upstream 0.5kb upstream 500 false Chr19: 6450264-6450763 Glycine max
Glyma.19G043900 0.5kb downstream 0.5kb downstream 7446 true Chr19: 6442818-6450263 Glycine max
Glyma.19G043900 0.5kb downstream 0.5kb downstream 500 false Chr19: 6442818-6443317 Glycine max
Glyma.19G043900 1.0kb upstream 1.0kb upstream 7946 true Chr19: 6443318-6451263 Glycine max
Glyma.19G043900 1.0kb upstream 1.0kb upstream 1000 false Chr19: 6450264-6451263 Glycine max
Glyma.19G043900 1.0kb downstream 1.0kb downstream 7946 true Chr19: 6442318-6450263 Glycine max
Glyma.19G043900 1.0kb downstream 1.0kb downstream 1000 false Chr19: 6442318-6443317 Glycine max
Glyma.19G043900 2.0kb upstream 2.0kb upstream 8946 true Chr19: 6443318-6452263 Glycine max
Glyma.19G043900 2.0kb upstream 2.0kb upstream 2000 false Chr19: 6450264-6452263 Glycine max
Glyma.19G043900 2.0kb downstream 2.0kb downstream 8946 true Chr19: 6441318-6450263 Glycine max
Glyma.19G043900 2.0kb downstream 2.0kb downstream 2000 false Chr19: 6441318-6443317 Glycine max
Glyma.19G043900 5.0kb upstream 5.0kb upstream 11946 true Chr19: 6443318-6455263 Glycine max
Glyma.19G043900 5.0kb upstream 5.0kb upstream 5000 false Chr19: 6450264-6455263 Glycine max
Glyma.19G043900 5.0kb downstream 5.0kb downstream 11946 true Chr19: 6438318-6450263 Glycine max
Glyma.19G043900 5.0kb downstream 5.0kb downstream 5000 false Chr19: 6438318-6443317 Glycine max
Glyma.19G043900 10.0kb upstream 10.0kb upstream 16946 true Chr19: 6443318-6460263 Glycine max
Glyma.19G043900 10.0kb upstream 10.0kb upstream 10000 false Chr19: 6450264-6460263 Glycine max
Glyma.19G043900 10.0kb downstream 10.0kb downstream 16946 true Chr19: 6433318-6450263 Glycine max
Glyma.19G043900 10.0kb downstream 10.0kb downstream 10000 false Chr19: 6433318-6443317 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121673388 5273 Angiosperm View MSA
122247915 5265 Fabidae Singleton cluster - no MSA
124075065 5270 Rosid View MSA
123628736 5271 Pentapetalae View MSA
122662990 5272 Eudicot View MSA
121350555 5274 Embryophyte View MSA
123424500 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.58276 0.0 5.42273   High
cufflinks 1.1273 0.0 3.98095    
cufflinks 1.15852 0.0 4.06603    
cufflinks 1.22507 0.0 4.29355    
cufflinks 0.971002 0.0 3.47049    
cufflinks 0.764062 0.0 2.7723   Low
cufflinks 1.60352 0.0 5.49356   High
cufflinks 1.24308 0.0 4.35314    
cufflinks 0.837395 0.0 3.02198   Low
cufflinks 0.419        
cufflinks 0.33        
cufflinks 0.885        
cufflinks 0.642        
cufflinks 0.635        
cufflinks 0.936        
cufflinks 1.085        
cufflinks 0.14       Low
cufflinks 1.054        
cufflinks 1.252        
cufflinks 1.343       High
cufflinks 0.432        
cufflinks 1.29        
cufflinks 1.194        
cufflinks 0.319       Low
cufflinks 1.26        
cufflinks 0.238       Low

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