Gene : Glyma.02G254300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR24006:SF428 - CORONATINE-INSENSITIVE PROTEIN 1 Genomic Order:  2543
Name:  ? Glyma.02G254300 Secondary Identifier:  ? PAC:30510313
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Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G254300 0.5kb upstream 0.5kb upstream 5695 true Chr02: 44131049-44136743 Glycine max
Glyma.02G254300 0.5kb upstream 0.5kb upstream 500 false Chr02: 44136244-44136743 Glycine max
Glyma.02G254300 0.5kb downstream 0.5kb downstream 5695 true Chr02: 44130549-44136243 Glycine max
Glyma.02G254300 0.5kb downstream 0.5kb downstream 500 false Chr02: 44130549-44131048 Glycine max
Glyma.02G254300 1.0kb upstream 1.0kb upstream 6195 true Chr02: 44131049-44137243 Glycine max
Glyma.02G254300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 44136244-44137243 Glycine max
Glyma.02G254300 1.0kb downstream 1.0kb downstream 6195 true Chr02: 44130049-44136243 Glycine max
Glyma.02G254300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 44130049-44131048 Glycine max
Glyma.02G254300 2.0kb upstream 2.0kb upstream 7195 true Chr02: 44131049-44138243 Glycine max
Glyma.02G254300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 44136244-44138243 Glycine max
Glyma.02G254300 2.0kb downstream 2.0kb downstream 7195 true Chr02: 44129049-44136243 Glycine max
Glyma.02G254300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 44129049-44131048 Glycine max
Glyma.02G254300 5.0kb upstream 5.0kb upstream 10195 true Chr02: 44131049-44141243 Glycine max
Glyma.02G254300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 44136244-44141243 Glycine max
Glyma.02G254300 5.0kb downstream 5.0kb downstream 10195 true Chr02: 44126049-44136243 Glycine max
Glyma.02G254300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 44126049-44131048 Glycine max
Glyma.02G254300 10.0kb upstream 10.0kb upstream 15195 true Chr02: 44131049-44146243 Glycine max
Glyma.02G254300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 44136244-44146243 Glycine max
Glyma.02G254300 10.0kb downstream 10.0kb downstream 15195 true Chr02: 44121049-44136243 Glycine max
Glyma.02G254300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 44121049-44131048 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313234 5265 Fabidae View MSA
124062956 5270 Rosid View MSA
123749708 5271 Pentapetalae View MSA
122790201 5272 Eudicot View MSA
122042626 5273 Angiosperm View MSA
121349676 5274 Embryophyte View MSA
123381396 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.617 0.0 39.0049   High
cufflinks 7.04561 0.0 19.2327    
cufflinks 10.4342 0.0 27.9495    
cufflinks 10.441 0.0 27.9644    
cufflinks 10.199 0.0 27.3195    
cufflinks 7.88323 0.0 21.3491    
cufflinks 3.47069 0.0 10.1779   Low
cufflinks 9.47134 0.0 25.456    
cufflinks 11.1397 0.0 29.7801    
cufflinks 0.97       Low
cufflinks 3.048        
cufflinks 5.461        
cufflinks 2.451        
cufflinks 2.787        
cufflinks 2.013        
cufflinks 4.479        
cufflinks 1.29       Low
cufflinks 5.085        
cufflinks 3.367        
cufflinks 8.482     High High
cufflinks 3.641        
cufflinks 7.005       High
cufflinks 2.492        
cufflinks 4.377        
cufflinks 6.733       High
cufflinks 1.948        

0 Strain