Gene : Glyma.02G261600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11709:SF22 - LACCASE-12-RELATED Genomic Order:  2616
Name:  ? Glyma.02G261600 Secondary Identifier:  ? PAC:30509013
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5466 Glycine max pathologic  
Gmax PWY-6824 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G261600 0.5kb upstream 0.5kb upstream 4730 true Chr02: 44758469-44763198 Glycine max
Glyma.02G261600 0.5kb upstream 0.5kb upstream 500 false Chr02: 44758469-44758968 Glycine max
Glyma.02G261600 0.5kb downstream 0.5kb downstream 4730 true Chr02: 44758969-44763698 Glycine max
Glyma.02G261600 0.5kb downstream 0.5kb downstream 500 false Chr02: 44763199-44763698 Glycine max
Glyma.02G261600 1.0kb upstream 1.0kb upstream 5230 true Chr02: 44757969-44763198 Glycine max
Glyma.02G261600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 44757969-44758968 Glycine max
Glyma.02G261600 1.0kb downstream 1.0kb downstream 5230 true Chr02: 44758969-44764198 Glycine max
Glyma.02G261600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 44763199-44764198 Glycine max
Glyma.02G261600 2.0kb upstream 2.0kb upstream 6230 true Chr02: 44756969-44763198 Glycine max
Glyma.02G261600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 44756969-44758968 Glycine max
Glyma.02G261600 2.0kb downstream 2.0kb downstream 6230 true Chr02: 44758969-44765198 Glycine max
Glyma.02G261600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 44763199-44765198 Glycine max
Glyma.02G261600 5.0kb upstream 5.0kb upstream 9230 true Chr02: 44753969-44763198 Glycine max
Glyma.02G261600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 44753969-44758968 Glycine max
Glyma.02G261600 5.0kb downstream 5.0kb downstream 9230 true Chr02: 44758969-44768198 Glycine max
Glyma.02G261600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 44763199-44768198 Glycine max
Glyma.02G261600 10.0kb upstream 10.0kb upstream 14230 true Chr02: 44748969-44763198 Glycine max
Glyma.02G261600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 44748969-44758968 Glycine max
Glyma.02G261600 10.0kb downstream 10.0kb downstream 14230 true Chr02: 44758969-44773198 Glycine max
Glyma.02G261600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 44763199-44773198 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300739 5265 Fabidae View MSA
124063263 5270 Rosid View MSA
123746086 5271 Pentapetalae View MSA
122788360 5272 Eudicot View MSA
122044394 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.981357 0.0 3.43093    
cufflinks 0.561618 0.0 2.04592   Low
cufflinks 1.90525 0.0 6.1981    
cufflinks 7.97367 0.0 21.7522    
cufflinks 4.36308 0.0 12.5637    
cufflinks 2.95291 0.0 8.97416    
cufflinks 0.692242 0.0 2.48038   Low
cufflinks 32.5842 0.0 89.7455 High High
cufflinks 3.93721 0.0 11.5053    
cufflinks 3.928       High
cufflinks 0.444        
cufflinks 0.437        
cufflinks 1.177        
cufflinks 0.174        
cufflinks 0.136        
cufflinks 0.063     Low  
cufflinks 3.221       High
cufflinks 0.034     Low  
cufflinks 0.463        
cufflinks 0.008     Low Low
cufflinks 0.848        
cufflinks 0.012     Low Low
cufflinks 0.051     Low  
cufflinks 0.511        
cufflinks 0.018     Low Low
cufflinks 1.982       High

0 Strain