Gene : Glyma.02G259700 G. max Wm82.a2.v1
Defline:  (1 of 6) PF04588 - Hypoxia induced protein conserved region (HIG_1_N) Genomic Order:  2597
Name:  ? Glyma.02G259700 Secondary Identifier:  ? PAC:30506474
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G259700 0.5kb upstream 0.5kb upstream 1811 true Chr02: 44657995-44659805 Glycine max
Glyma.02G259700 0.5kb upstream 0.5kb upstream 500 false Chr02: 44657995-44658494 Glycine max
Glyma.02G259700 0.5kb downstream 0.5kb downstream 1811 true Chr02: 44658495-44660305 Glycine max
Glyma.02G259700 0.5kb downstream 0.5kb downstream 500 false Chr02: 44659806-44660305 Glycine max
Glyma.02G259700 1.0kb upstream 1.0kb upstream 2311 true Chr02: 44657495-44659805 Glycine max
Glyma.02G259700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 44657495-44658494 Glycine max
Glyma.02G259700 1.0kb downstream 1.0kb downstream 2311 true Chr02: 44658495-44660805 Glycine max
Glyma.02G259700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 44659806-44660805 Glycine max
Glyma.02G259700 2.0kb upstream 2.0kb upstream 3311 true Chr02: 44656495-44659805 Glycine max
Glyma.02G259700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 44656495-44658494 Glycine max
Glyma.02G259700 2.0kb downstream 2.0kb downstream 3311 true Chr02: 44658495-44661805 Glycine max
Glyma.02G259700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 44659806-44661805 Glycine max
Glyma.02G259700 5.0kb upstream 5.0kb upstream 6311 true Chr02: 44653495-44659805 Glycine max
Glyma.02G259700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 44653495-44658494 Glycine max
Glyma.02G259700 5.0kb downstream 5.0kb downstream 6311 true Chr02: 44658495-44664805 Glycine max
Glyma.02G259700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 44659806-44664805 Glycine max
Glyma.02G259700 10.0kb upstream 10.0kb upstream 11311 true Chr02: 44648495-44659805 Glycine max
Glyma.02G259700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 44648495-44658494 Glycine max
Glyma.02G259700 10.0kb downstream 10.0kb downstream 11311 true Chr02: 44658495-44669805 Glycine max
Glyma.02G259700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 44659806-44669805 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122242008 5265 Fabidae Singleton cluster - no MSA
123986778 5270 Rosid Singleton cluster - no MSA
123562104 5271 Pentapetalae Singleton cluster - no MSA
122596892 5272 Eudicot Singleton cluster - no MSA
122049658 5273 Angiosperm View MSA
123428942 5275 Viridiplantae View MSA
121349742 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.121331 0.0 0.49428 Low Low
cufflinks 0.757659 0.0 2.86407    
cufflinks 0.349498 0.0 1.36405    
cufflinks 1.56449 0.0 5.69859    
cufflinks 105.542 0.0 293.694 High High
cufflinks 0.834615 0.0 3.14075    
cufflinks 0.541761 0.0 2.07657    
cufflinks 1.83872 0.0 6.62675    
cufflinks 236.371 0.0 737.702 High High
cufflinks 0.815        
cufflinks 195.772     High High
cufflinks 0.248        
cufflinks 0.162        
cufflinks 0.148        
cufflinks 167.719     High High
cufflinks 0.914        
cufflinks 167.626     High High
cufflinks 0.207        
cufflinks 1.492        
cufflinks 0.136        
cufflinks 443.371     High High
cufflinks 0.308        
cufflinks 0.166        
cufflinks 201.567     High High
cufflinks 0.497        
cufflinks 176.57     High High

0 Strain