Gene : Glyma.02G258000 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR32285:SF10 - PROTEIN ESKIMO 1 Genomic Order:  2580
Name:  ? Glyma.02G258000 Secondary Identifier:  ? PAC:30509389
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G258000 0.5kb upstream 0.5kb upstream 4500 true Chr02: 44456866-44461365 Glycine max
Glyma.02G258000 0.5kb upstream 0.5kb upstream 500 false Chr02: 44456866-44457365 Glycine max
Glyma.02G258000 0.5kb downstream 0.5kb downstream 4500 true Chr02: 44457366-44461865 Glycine max
Glyma.02G258000 0.5kb downstream 0.5kb downstream 500 false Chr02: 44461366-44461865 Glycine max
Glyma.02G258000 1.0kb upstream 1.0kb upstream 5000 true Chr02: 44456366-44461365 Glycine max
Glyma.02G258000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 44456366-44457365 Glycine max
Glyma.02G258000 1.0kb downstream 1.0kb downstream 5000 true Chr02: 44457366-44462365 Glycine max
Glyma.02G258000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 44461366-44462365 Glycine max
Glyma.02G258000 2.0kb upstream 2.0kb upstream 6000 true Chr02: 44455366-44461365 Glycine max
Glyma.02G258000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 44455366-44457365 Glycine max
Glyma.02G258000 2.0kb downstream 2.0kb downstream 6000 true Chr02: 44457366-44463365 Glycine max
Glyma.02G258000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 44461366-44463365 Glycine max
Glyma.02G258000 5.0kb upstream 5.0kb upstream 9000 true Chr02: 44452366-44461365 Glycine max
Glyma.02G258000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 44452366-44457365 Glycine max
Glyma.02G258000 5.0kb downstream 5.0kb downstream 9000 true Chr02: 44457366-44466365 Glycine max
Glyma.02G258000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 44461366-44466365 Glycine max
Glyma.02G258000 10.0kb upstream 10.0kb upstream 14000 true Chr02: 44447366-44461365 Glycine max
Glyma.02G258000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 44447366-44457365 Glycine max
Glyma.02G258000 10.0kb downstream 10.0kb downstream 14000 true Chr02: 44457366-44471365 Glycine max
Glyma.02G258000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 44461366-44471365 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307023 5265 Fabidae View MSA
124066742 5270 Rosid View MSA
123749554 5271 Pentapetalae View MSA
122786005 5272 Eudicot View MSA
122051004 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121312244 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.0744 0.0 5.57142   Low
cufflinks 2.52578 0.0 10.178    
cufflinks 1.11788 0.0 5.77276   Low
cufflinks 28.0411 0.0 89.1159 High High
cufflinks 4.43568 0.0 15.2279    
cufflinks 1.99744 0.0 8.65204    
cufflinks 12.0942 0.0 37.6332    
cufflinks 46.1027 0.0 160.472 High High
cufflinks 9.72417 0.0 29.9819    
cufflinks 8.962     High High
cufflinks 0.417        
cufflinks 0.333       Low
cufflinks 2.975       High
cufflinks 0.48        
cufflinks 0.241       Low
cufflinks 0.801        
cufflinks 1.878        
cufflinks 0.648        
cufflinks 1.2        
cufflinks 0.845        
cufflinks 0.825        
cufflinks 0.961        
cufflinks 0.742        
cufflinks 1.101        
cufflinks 0.955        
cufflinks 1.636        

0 Strain