Gene : Glyma.02G258200 G. max Wm82.a2.v1
Defline:  (1 of 10) PTHR10292 - CLATHRIN HEAVY CHAIN Genomic Order:  2582
Name:  ? Glyma.02G258200 Secondary Identifier:  ? PAC:30509454
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G258200 0.5kb upstream 0.5kb upstream 13809 true Chr02: 44514600-44528408 Glycine max
Glyma.02G258200 0.5kb upstream 0.5kb upstream 500 false Chr02: 44514600-44515099 Glycine max
Glyma.02G258200 0.5kb downstream 0.5kb downstream 13809 true Chr02: 44515100-44528908 Glycine max
Glyma.02G258200 0.5kb downstream 0.5kb downstream 500 false Chr02: 44528409-44528908 Glycine max
Glyma.02G258200 1.0kb upstream 1.0kb upstream 14309 true Chr02: 44514100-44528408 Glycine max
Glyma.02G258200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 44514100-44515099 Glycine max
Glyma.02G258200 1.0kb downstream 1.0kb downstream 14309 true Chr02: 44515100-44529408 Glycine max
Glyma.02G258200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 44528409-44529408 Glycine max
Glyma.02G258200 2.0kb upstream 2.0kb upstream 15309 true Chr02: 44513100-44528408 Glycine max
Glyma.02G258200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 44513100-44515099 Glycine max
Glyma.02G258200 2.0kb downstream 2.0kb downstream 15309 true Chr02: 44515100-44530408 Glycine max
Glyma.02G258200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 44528409-44530408 Glycine max
Glyma.02G258200 5.0kb upstream 5.0kb upstream 18309 true Chr02: 44510100-44528408 Glycine max
Glyma.02G258200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 44510100-44515099 Glycine max
Glyma.02G258200 5.0kb downstream 5.0kb downstream 18309 true Chr02: 44515100-44533408 Glycine max
Glyma.02G258200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 44528409-44533408 Glycine max
Glyma.02G258200 10.0kb upstream 10.0kb upstream 23309 true Chr02: 44505100-44528408 Glycine max
Glyma.02G258200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 44505100-44515099 Glycine max
Glyma.02G258200 10.0kb downstream 10.0kb downstream 23309 true Chr02: 44515100-44538408 Glycine max
Glyma.02G258200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 44528409-44538408 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027117 5273 Angiosperm View MSA
122311720 5265 Fabidae View MSA
124064401 5270 Rosid View MSA
123744166 5271 Pentapetalae View MSA
122788856 5272 Eudicot View MSA
121350817 5274 Embryophyte View MSA
123428843 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.2974 0.0 104.17 High High
cufflinks 22.1125 0.0 66.7735 High  
cufflinks 28.1332 0.0 88.9681 High  
cufflinks 29.479 0.0 93.6325 High  
cufflinks 25.227 0.0 77.5842 High  
cufflinks 18.0725 0.0 52.9408   Low
cufflinks 31.5805 0.0 101.184 High High
cufflinks 24.2621 0.0 74.4869 High  
cufflinks 22.1872 0.0 67.0523 High  
cufflinks 18.785     High High
cufflinks 8.026     High Low
cufflinks 15.396     High  
cufflinks 17.043     High  
cufflinks 18.626     High High
cufflinks 10.95     High  
cufflinks 13.697     High  
cufflinks 11.431     High  
cufflinks 17.868     High High
cufflinks 16.878     High  
cufflinks 12.917     High  
cufflinks 11.105     High  
cufflinks 14.139     High  
cufflinks 14.852     High  
cufflinks 9.681     High Low
cufflinks 12.525     High  
cufflinks 12.35     High  

0 Strain