Gene : Glyma.19G045800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22936:SF4 - RHOMBOID FAMILY PROTEIN Genomic Order:  458
Name:  ? Glyma.19G045800 Secondary Identifier:  ? PAC:30514585
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G045800 0.5kb upstream 0.5kb upstream 5870 true Chr19: 6812370-6818239 Glycine max
Glyma.19G045800 0.5kb upstream 0.5kb upstream 500 false Chr19: 6817740-6818239 Glycine max
Glyma.19G045800 0.5kb downstream 0.5kb downstream 5870 true Chr19: 6811870-6817739 Glycine max
Glyma.19G045800 0.5kb downstream 0.5kb downstream 500 false Chr19: 6811870-6812369 Glycine max
Glyma.19G045800 1.0kb upstream 1.0kb upstream 6370 true Chr19: 6812370-6818739 Glycine max
Glyma.19G045800 1.0kb upstream 1.0kb upstream 1000 false Chr19: 6817740-6818739 Glycine max
Glyma.19G045800 1.0kb downstream 1.0kb downstream 6370 true Chr19: 6811370-6817739 Glycine max
Glyma.19G045800 1.0kb downstream 1.0kb downstream 1000 false Chr19: 6811370-6812369 Glycine max
Glyma.19G045800 2.0kb upstream 2.0kb upstream 7370 true Chr19: 6812370-6819739 Glycine max
Glyma.19G045800 2.0kb upstream 2.0kb upstream 2000 false Chr19: 6817740-6819739 Glycine max
Glyma.19G045800 2.0kb downstream 2.0kb downstream 7370 true Chr19: 6810370-6817739 Glycine max
Glyma.19G045800 2.0kb downstream 2.0kb downstream 2000 false Chr19: 6810370-6812369 Glycine max
Glyma.19G045800 5.0kb upstream 5.0kb upstream 10370 true Chr19: 6812370-6822739 Glycine max
Glyma.19G045800 5.0kb upstream 5.0kb upstream 5000 false Chr19: 6817740-6822739 Glycine max
Glyma.19G045800 5.0kb downstream 5.0kb downstream 10370 true Chr19: 6807370-6817739 Glycine max
Glyma.19G045800 5.0kb downstream 5.0kb downstream 5000 false Chr19: 6807370-6812369 Glycine max
Glyma.19G045800 10.0kb upstream 10.0kb upstream 15370 true Chr19: 6812370-6827739 Glycine max
Glyma.19G045800 10.0kb upstream 10.0kb upstream 10000 false Chr19: 6817740-6827739 Glycine max
Glyma.19G045800 10.0kb downstream 10.0kb downstream 15370 true Chr19: 6802370-6817739 Glycine max
Glyma.19G045800 10.0kb downstream 10.0kb downstream 10000 false Chr19: 6802370-6812369 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026735 5273 Angiosperm View MSA
122302264 5265 Fabidae View MSA
124068357 5270 Rosid View MSA
123736772 5271 Pentapetalae View MSA
122786415 5272 Eudicot View MSA
121346817 5274 Embryophyte View MSA
123428054 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 48.9615 0.0 390.016 High High
cufflinks 6.37579 0.0 36.4572    
cufflinks 14.6395 0.0 90.1538    
cufflinks 10.0445 0.0 59.607    
cufflinks 0.504388 0.0 3.18137   Low
cufflinks 0.582231 0.0 3.47645   Low
cufflinks 12.7361 0.0 63.5231    
cufflinks 14.3578 0.0 91.1921    
cufflinks 1.17347 0.0 8.86381    
cufflinks 0.383        
cufflinks 0.002     Low Low
cufflinks 0.444        
cufflinks 0.005     Low  
cufflinks 0.001     Low Low
cufflinks 0.018     Low  
cufflinks 0.513        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.284        
cufflinks 0.257        
cufflinks 0.62        
cufflinks 0.001     Low Low
cufflinks 0.787        
cufflinks 0.545        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.727        
cufflinks 0.001     Low Low

0 Strain