Gene : Glyma.02G272400 G. max Wm82.a2.v1
Defline:  (1 of 4) 1.2.3.1 - Aldehyde oxidase / Retinal oxidase Genomic Order:  2724
Name:  ? Glyma.02G272400 Secondary Identifier:  ? PAC:30507634
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G272400 0.5kb upstream 0.5kb upstream 9947 true Chr02: 45619246-45629192 Glycine max
Glyma.02G272400 0.5kb upstream 0.5kb upstream 500 false Chr02: 45628693-45629192 Glycine max
Glyma.02G272400 0.5kb downstream 0.5kb downstream 9947 true Chr02: 45618746-45628692 Glycine max
Glyma.02G272400 0.5kb downstream 0.5kb downstream 500 false Chr02: 45618746-45619245 Glycine max
Glyma.02G272400 1.0kb upstream 1.0kb upstream 10447 true Chr02: 45619246-45629692 Glycine max
Glyma.02G272400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 45628693-45629692 Glycine max
Glyma.02G272400 1.0kb downstream 1.0kb downstream 10447 true Chr02: 45618246-45628692 Glycine max
Glyma.02G272400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 45618246-45619245 Glycine max
Glyma.02G272400 2.0kb upstream 2.0kb upstream 11447 true Chr02: 45619246-45630692 Glycine max
Glyma.02G272400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 45628693-45630692 Glycine max
Glyma.02G272400 2.0kb downstream 2.0kb downstream 11447 true Chr02: 45617246-45628692 Glycine max
Glyma.02G272400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 45617246-45619245 Glycine max
Glyma.02G272400 5.0kb upstream 5.0kb upstream 14447 true Chr02: 45619246-45633692 Glycine max
Glyma.02G272400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 45628693-45633692 Glycine max
Glyma.02G272400 5.0kb downstream 5.0kb downstream 14447 true Chr02: 45614246-45628692 Glycine max
Glyma.02G272400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 45614246-45619245 Glycine max
Glyma.02G272400 10.0kb upstream 10.0kb upstream 19447 true Chr02: 45619246-45638692 Glycine max
Glyma.02G272400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 45628693-45638692 Glycine max
Glyma.02G272400 10.0kb downstream 10.0kb downstream 19447 true Chr02: 45609246-45628692 Glycine max
Glyma.02G272400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 45609246-45619245 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121782967 5273 Angiosperm View MSA
122315868 5265 Fabidae View MSA
124041273 5270 Rosid View MSA
123754193 5271 Pentapetalae View MSA
122775589 5272 Eudicot View MSA
123429224 5275 Viridiplantae View MSA
121054463 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.0599 0.0 44.7215    
cufflinks 9.03462 0.0 24.2324    
cufflinks 18.3048 0.0 51.9569   High
cufflinks 9.67615 0.0 26.0347    
cufflinks 2.16495 0.0 6.15611   Low
cufflinks 2.43855 0.0 6.83463   Low
cufflinks 21.0247 0.0 60.2665   High
cufflinks 7.08123 0.0 18.8985    
cufflinks 1.56377 0.0 4.62103   Low
cufflinks 4.266        
cufflinks 1.212        
cufflinks 8.014     High  
cufflinks 0.646       Low
cufflinks 0.433       Low
cufflinks 0.859        
cufflinks 17.344     High High
cufflinks 1.038        
cufflinks 7.606     High  
cufflinks 5.698        
cufflinks 23.703     High High
cufflinks 0.837        
cufflinks 23.072     High High
cufflinks 14.872     High High
cufflinks 1.341        
cufflinks 20.631     High High
cufflinks 0.73       Low

0 Strain